Strain Fitness in Pseudomonas simiae WCS417 around PS417_10040

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,156,893	+				+1.5
2,156,893	+				+0.6
2,156,912	+				-0.8
2,156,913	-				-0.6
2,156,916	+				+0.2
2,156,981	-		PS417_10035	0.18	+0.4
2,156,990	+		PS417_10035	0.19	-0.2
2,156,991	-		PS417_10035	0.20	-0.1
2,156,991	-		PS417_10035	0.20	-0.4
2,157,069	+				+1.0
2,157,076	-		PS417_10035	0.31	+0.8
2,157,096	-		PS417_10035	0.33	+0.9
2,157,096	-		PS417_10035	0.33	-3.4
2,157,161	-				+0.2
2,157,192	+		PS417_10035	0.46	-1.6
2,157,193	-		PS417_10035	0.46	-1.4
2,157,251	-		PS417_10035	0.54	-2.1
2,157,251	-		PS417_10035	0.54	+0.2
2,157,277	+		PS417_10035	0.57	+0.8
2,157,277	+		PS417_10035	0.57	-0.8
2,157,277	+		PS417_10035	0.57	-3.3
2,157,278	-		PS417_10035	0.57	+0.6
2,157,370	+		PS417_10035	0.69	-0.7
2,157,577	+				-3.7
2,157,603	+				+0.3
2,157,603	+				-1.2
2,157,603	+				-0.1
2,157,604	-				-2.0
2,157,604	-				+0.3
2,157,617	+				-1.0
2,157,617	+				-0.8
2,157,617	+				+0.1
2,157,618	-				-1.8
2,157,656	-				-1.7
2,157,773	+				-2.5
2,157,810	+				-1.0
2,157,810	+				-0.2
2,157,811	-				-0.1
2,157,814	+				-0.0
2,157,814	+				+0.9
2,157,963	+		PS417_10040	0.47	-2.5
2,158,203	+		PS417_10045	0.19	+0.4
2,158,247	+		PS417_10045	0.31	+0.6
2,158,280	-		PS417_10045	0.41	+0.2
2,158,555	+				-1.7
2,158,555	+				+0.5
2,158,555	+				-1.4
2,158,575	+				-0.1
2,158,603	-				-2.1
2,158,603	-				-0.2
2,158,603	-				-0.3
2,158,633	-		PS417_10050	0.16	+0.5
2,158,653	-		PS417_10050	0.26	-1.0
2,158,779	+				-1.2
2,158,780	-				-0.2
2,158,780	-				-0.8
2,158,855	+				+0.6
2,158,856	-				+0.8
2,158,904	-		PS417_10055	0.25	-0.3