Strain Fitness in Pseudomonas simiae WCS417 around PS417_09930

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,143,563	-		PS417_09915	0.68	-1.9
2,143,813	+				-0.0
2,143,891	-				+1.7
2,144,053	+		PS417_09920	0.12	+1.5
2,144,089	+		PS417_09920	0.28	-0.8
2,144,109	+		PS417_09920	0.37	-0.9
2,144,109	+		PS417_09920	0.37	+0.1
2,144,109	+		PS417_09920	0.37	-2.4
2,144,110	-		PS417_09920	0.37	-0.5
2,144,110	-		PS417_09920	0.37	-0.1
2,144,111	+		PS417_09920	0.38	-1.4
2,144,112	-		PS417_09920	0.38	-0.4
2,144,375	+		PS417_09925	0.56	+0.0
2,144,376	-		PS417_09925	0.57	+1.1
2,144,415	+		PS417_09925	0.73	-0.6
2,144,416	-		PS417_09925	0.73	+1.5
2,144,419	+		PS417_09925	0.75	+1.4
2,144,690	+		PS417_09930	0.88	-3.0
2,144,691	-		PS417_09930	0.88	-2.7
2,144,701	-				-1.0
2,144,811	+				-0.2
2,144,953	+		PS417_09935	0.16	-2.3
2,144,953	+		PS417_09935	0.16	-0.6
2,144,953	+		PS417_09935	0.16	-2.6
2,144,953	+		PS417_09935	0.16	-0.5
2,144,953	+		PS417_09935	0.16	-0.1
2,144,954	-		PS417_09935	0.16	-1.0
2,144,954	-				+0.2
2,144,954	-		PS417_09935	0.16	-4.0
2,144,984	-				-0.2
2,145,168	-		PS417_09935	0.57	-0.8
2,145,341	-				-0.8
2,145,382	+				-3.3
2,145,689	+				+0.3
2,145,690	-				+0.2
2,145,701	+				-2.0
2,145,701	+				+0.9
2,145,702	-				-0.8
2,145,702	-				-1.4
2,145,702	-				-1.4
2,145,702	-				-4.0
2,145,718	+				+0.8