Strain Fitness in Pseudomonas simiae WCS417 around PS417_09835

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,130,882	+		PS417_09825	0.79	-0.2
2,130,882	+		PS417_09825	0.79	-0.2
2,130,883	-		PS417_09825	0.79	-0.4
2,130,910	+		PS417_09825	0.86	-1.4
2,130,910	+		PS417_09825	0.86	+2.0
2,130,911	-		PS417_09825	0.86	+1.7
2,130,911	-		PS417_09825	0.86	+0.9
2,130,912	+		PS417_09825	0.87	-1.0
2,130,912	+		PS417_09825	0.87	+0.2
2,130,912	+		PS417_09825	0.87	-0.4
2,130,913	-		PS417_09825	0.87	+1.0
2,130,913	-		PS417_09825	0.87	-3.1
2,130,913	-		PS417_09825	0.87	+0.3
2,130,913	-				+4.6
2,130,913	-		PS417_09825	0.87	-0.2
2,130,961	+				+0.7
2,130,961	+				+1.4
2,130,961	+				+0.3
2,130,961	+				-0.1
2,130,962	-				+1.1
2,130,962	-				-0.5
2,130,989	+				+0.7
2,131,035	+				+0.2
2,131,074	+				+1.3
2,131,075	-				+0.8
2,131,237	+		PS417_09830	0.41	-0.8
2,131,237	+		PS417_09830	0.41	-2.0
2,131,238	-		PS417_09830	0.42	+0.3
2,131,258	+		PS417_09830	0.47	-0.1
2,131,259	-		PS417_09830	0.48	-0.5
2,131,379	+		PS417_09830	0.81	+1.4
2,131,380	-		PS417_09830	0.82	-1.0
2,131,380	-		PS417_09830	0.82	+0.1
2,131,424	+				-1.1
2,131,503	+				-1.7
2,131,602	-				-1.7
2,131,647	-				-0.0
2,131,667	+				-2.4
2,131,667	+				-0.8
2,131,668	-				-0.0
2,131,668	-				+0.9
2,131,715	+				+0.3
2,131,716	-				-2.4
2,131,716	-				-0.1
2,131,716	-				+0.2
2,131,716	-				-2.8
2,131,721	+				+0.7
2,131,727	+				+0.3
2,131,727	+				+0.0
2,131,728	-				-0.8
2,131,728	-				-1.4
2,131,803	-				+0.8
2,131,808	+				+1.2
2,131,854	+		PS417_09835	0.13	+1.1
2,131,949	+		PS417_09835	0.39	-0.5
2,131,949	+		PS417_09835	0.39	-0.2
2,131,949	+		PS417_09835	0.39	-0.5
2,131,953	-		PS417_09835	0.41	-2.2
2,132,075	+		PS417_09835	0.74	-0.7
2,132,103	-		PS417_09835	0.82	-1.0
2,132,166	+				+0.1
2,132,166	+				-0.2
2,132,166	+				+0.5
2,132,167	-				+0.1
2,132,167	-				-1.5
2,132,299	-				+0.1
2,132,327	-				-0.3
2,132,327	-				+2.0
2,132,327	-				-0.9
2,132,375	+				+0.7
2,132,375	+				+0.2
2,132,375	+				-0.9
2,132,376	-				-0.4
2,132,398	-				+0.2
2,132,462	+		PS417_09840	0.22	-0.2
2,132,473	+		PS417_09840	0.25	-3.1
2,132,479	+		PS417_09840	0.27	+2.4
2,132,480	-		PS417_09840	0.27	+0.8
2,132,480	-				-0.5
2,132,480	-		PS417_09840	0.27	-1.7
2,132,485	+		PS417_09840	0.28	+0.2
2,132,485	+		PS417_09840	0.28	+0.1
2,132,486	-		PS417_09840	0.28	-0.4
2,132,597	+		PS417_09840	0.55	+1.1
2,132,597	+		PS417_09840	0.55	-0.6
2,132,598	-		PS417_09840	0.55	-0.0
2,132,703	+		PS417_09840	0.81	+0.5
2,132,704	-		PS417_09840	0.81	-0.7
2,132,704	-		PS417_09840	0.81	-0.1
2,132,704	-		PS417_09840	0.81	-0.3
2,132,721	-		PS417_09840	0.85	+0.8
2,132,721	-		PS417_09840	0.85	+0.2
2,132,737	+		PS417_09840	0.89	-1.0
2,132,737	+				+0.2
2,132,737	+		PS417_09840	0.89	-0.2
2,132,738	-		PS417_09840	0.89	+1.1
2,132,738	-		PS417_09840	0.89	+0.9
2,132,738	-		PS417_09840	0.89	+0.0
2,132,738	-		PS417_09840	0.89	+1.2
2,132,780	+				+0.7
2,132,859	-				+0.8
2,132,859	-				+1.5
2,132,867	+				+0.8
2,132,901	+				-1.6
2,132,901	+				-2.3
2,132,902	-				+3.5
2,132,905	+				+0.2