Strain Fitness in Pseudomonas simiae WCS417 around PS417_09800

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,124,670	+		PS417_09795	0.55	+0.3
2,124,670	+		PS417_09795	0.55	+1.5
2,124,670	+		PS417_09795	0.55	-0.7
2,124,749	+		PS417_09795	0.59	+0.2
2,124,749	+		PS417_09795	0.59	+0.1
2,124,765	-		PS417_09795	0.60	-1.3
2,124,770	+		PS417_09795	0.60	+0.7
2,125,196	+		PS417_09795	0.80	-1.2
2,125,197	-		PS417_09795	0.80	+0.9
2,125,197	-		PS417_09795	0.80	+1.7
2,125,221	+		PS417_09795	0.81	+0.4
2,125,704	-				+3.1
2,125,737	-				+1.0
2,126,055	+		PS417_09800	0.33	-0.0
2,126,123	+		PS417_09800	0.39	-1.0
2,126,275	-		PS417_09800	0.51	+0.1
2,126,330	+		PS417_09800	0.56	-0.9
2,126,957	+				+1.2
2,126,958	-				-1.3
2,127,061	-		PS417_09805	0.13	-1.5
2,127,218	+		PS417_09805	0.26	+0.8
2,127,219	-		PS417_09805	0.26	+0.1
2,127,358	+		PS417_09805	0.38	-3.3
2,127,666	-		PS417_09805	0.63	-4.0
2,127,848	+		PS417_09805	0.78	-1.0
2,127,849	-		PS417_09805	0.78	+0.9
2,127,849	-		PS417_09805	0.78	-0.1
2,127,849	-		PS417_09805	0.78	-1.7