Strain Fitness in Pseudomonas simiae WCS417 around PS417_09580

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,073,723	+				+0.2
2,073,724	-				+1.8
2,073,724	-				+0.8
2,073,741	+				-0.7
2,073,741	+				+0.8
2,073,741	+				+0.1
2,073,742	-				+0.5
2,073,966	+		PS417_09575	0.36	-1.3
2,074,024	-		PS417_09575	0.45	-0.4
2,074,024	-		PS417_09575	0.45	-2.2
2,074,334	-				+0.4
2,074,519	+				+0.5
2,074,603	+		PS417_09580	0.12	-0.6
2,074,751	+		PS417_09580	0.38	-1.3
2,074,751	+		PS417_09580	0.38	-1.6
2,074,817	-		PS417_09580	0.49	-3.6
2,075,363	+		PS417_09585	0.22	+1.4
2,075,363	+		PS417_09585	0.22	+0.3
2,075,364	-		PS417_09585	0.22	-0.0
2,075,364	-		PS417_09585	0.22	-4.3
2,075,364	-		PS417_09585	0.22	+1.1
2,075,427	-		PS417_09585	0.28	-3.4
2,075,428	+		PS417_09585	0.28	-1.0
2,075,429	-		PS417_09585	0.28	+0.7
2,075,609	+		PS417_09585	0.45	-1.9
2,075,610	-				+1.0
2,075,610	-		PS417_09585	0.45	-0.3
2,075,610	-				-0.8
2,075,610	-		PS417_09585	0.45	-1.2
2,075,939	+		PS417_09585	0.77	+0.1
2,075,939	+		PS417_09585	0.77	+0.4
2,075,944	-		PS417_09585	0.77	-0.0
2,075,944	-		PS417_09585	0.77	-1.6
2,075,944	-		PS417_09585	0.77	+0.7
2,075,944	-		PS417_09585	0.77	+2.1