Strain Fitness in Pseudomonas simiae WCS417 around PS417_09475

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,050,251	+		PS417_09465	0.86	+0.3
2,050,539	+				-0.6
2,050,539	+				-0.1
2,050,541	+				+0.5
2,050,542	-				-2.1
2,050,542	-				+0.3
2,050,646	+				+1.9
2,050,686	-				+1.4
2,050,819	-		PS417_09470	0.33	+0.9
2,050,888	-		PS417_09470	0.58	-1.3
2,051,119	-				-1.9
2,051,119	-				-0.4
2,051,119	-				+0.0
2,051,122	+				-2.4
2,051,138	+				+0.9
2,051,239	+				-1.0
2,051,239	+				+0.7
2,051,252	+				-0.3
2,051,261	+				+0.7
2,051,603	+		PS417_09475	0.32	+0.8
2,051,886	-		PS417_09475	0.56	-1.9
2,052,124	+		PS417_09475	0.77	-0.7
2,052,124	+		PS417_09475	0.77	+1.2
2,052,286	+				+1.3
2,052,314	-				-0.8
2,052,314	-				+0.1
2,052,401	+				-1.5
2,052,402	-				+0.7
2,052,413	+				+0.6
2,052,414	-				-1.6
2,052,414	-				-0.0
2,052,416	+				+0.2
2,052,417	-				+3.7
2,052,450	-				+0.5
2,052,568	-				-2.1
2,052,939	+		PS417_09480	0.27	+0.5
2,052,940	-		PS417_09480	0.27	-0.1