Strain Fitness in Pseudomonas simiae WCS417 around PS417_09120

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,979,451	+				-1.7
1,979,451	+				+0.5
1,979,452	-				-1.0
1,979,453	+				-1.1
1,979,453	+				-1.3
1,979,455	+				-0.2
1,979,455	+				+0.1
1,979,455	+				+1.3
1,979,455	+				-2.8
1,979,455	+				-0.1
1,979,456	-				-0.0
1,979,456	-				-0.0
1,979,456	-				-1.9
1,979,456	-				+0.4
1,979,459	+				-1.9
1,979,508	+				+0.7
1,979,509	-				+0.4
1,979,509	-				-0.5
1,979,509	-				-1.2
1,979,510	+				+1.1
1,979,511	-				-3.2
1,979,535	+				-0.4
1,979,535	+				-0.6
1,979,536	-				+3.3
1,979,536	-				+0.8
1,980,333	-		PS417_09115	0.26	-1.5
1,980,443	+				-2.0
1,980,620	-		PS417_09120	0.12	-3.7
1,980,643	+		PS417_09120	0.14	-0.6
1,980,884	+		PS417_09120	0.30	+0.1
1,980,932	+		PS417_09120	0.33	+0.0
1,980,932	+		PS417_09120	0.33	-0.7
1,980,933	-		PS417_09120	0.33	-2.5
1,980,933	-				+2.8
1,980,933	-		PS417_09120	0.33	-0.8
1,980,995	+		PS417_09120	0.37	-0.8
1,981,072	+		PS417_09120	0.43	+0.1
1,981,073	-		PS417_09120	0.43	+0.9
1,981,118	+		PS417_09120	0.46	-0.1
1,981,118	+		PS417_09120	0.46	-2.7
1,981,129	+		PS417_09120	0.46	-0.8
1,981,305	-		PS417_09120	0.58	+0.3
1,981,586	+				-1.3
1,981,731	-		PS417_09120	0.87	+0.2
1,982,000	+				+0.3
1,982,006	+				+1.5
1,982,006	+				+0.5
1,982,007	-				+0.3
1,982,163	+				-2.7
1,982,163	+				-0.6
1,982,163	+				+0.4
1,982,163	+				-0.3
1,982,164	-				-1.5
1,982,703	+		PS417_09125	0.42	+2.0
1,982,865	+		PS417_09125	0.52	+1.3
1,982,866	-		PS417_09125	0.52	+1.2