Strain Fitness in Pseudomonas simiae WCS417 around PS417_09080

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,977,066	+		PS417_09075	0.74	+0.0
1,977,067	-		PS417_09075	0.74	-0.4
1,977,194	+		PS417_09075	0.80	-2.2
1,977,498	+				+0.9
1,977,558	+				-0.3
1,977,559	-				+1.8
1,977,688	+				-2.1
1,977,831	-		PS417_09080	0.26	-0.1
1,977,831	-		PS417_09080	0.26	+0.5
1,977,831	-		PS417_09080	0.26	-0.2
1,977,831	-		PS417_09080	0.26	+0.2
1,977,831	-		PS417_09080	0.26	+1.8
1,977,898	-		PS417_09080	0.34	+0.7
1,977,927	+				-0.5
1,977,927	+				-0.2
1,978,038	+		PS417_09080	0.51	+0.6
1,978,074	+		PS417_09080	0.56	+1.8
1,978,075	-		PS417_09080	0.56	-0.2
1,978,075	-		PS417_09080	0.56	-3.4
1,978,141	+		PS417_09080	0.64	+1.0
1,978,350	+		PS417_09080	0.90	-0.1
1,978,350	+		PS417_09080	0.90	+0.9
1,978,351	-				+0.1
1,978,391	+				+0.3
1,978,456	+				-0.7
1,978,457	-				+0.3
1,978,592	+				-0.4
1,978,768	-		PS417_09085	0.24	-1.6
1,979,232	+		PS417_09085	0.84	+1.1
1,979,291	+				+0.6
1,979,291	+				-1.7
1,979,292	-				+0.1
1,979,327	-				+1.7
1,979,372	+				+1.8
1,979,372	+				+0.1
1,979,384	+				+0.0
1,979,391	+				-0.1