Strain Fitness in Pseudomonas simiae WCS417 around PS417_09040

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,966,975	+				-2.9
1,966,975	+				+1.2
1,966,976	-				-2.7
1,966,997	-				-3.1
1,967,134	+		PS417_09035	0.19	+2.1
1,967,135	-		PS417_09035	0.19	-0.1
1,967,138	+		PS417_09035	0.20	-0.7
1,967,226	-		PS417_09035	0.31	-1.5
1,967,496	+		PS417_09035	0.63	+1.2
1,967,798	+				-0.6
1,967,830	-				-0.3
1,967,842	+				+0.4
1,967,842	+				+0.8
1,967,864	+				+2.3
1,967,864	+				+0.8
1,967,865	-				-0.4
1,967,865	-				-0.2
1,967,875	+				-3.1
1,968,182	-		PS417_09040	0.30	-0.0
1,968,281	+		PS417_09040	0.39	+0.1
1,968,452	+		PS417_09040	0.55	+1.1
1,968,452	+		PS417_09040	0.55	+0.9
1,968,453	-		PS417_09040	0.55	+0.5
1,968,455	+		PS417_09040	0.55	-2.4
1,968,671	+		PS417_09040	0.76	+1.0
1,968,671	+		PS417_09040	0.76	-1.3
1,968,672	-		PS417_09040	0.76	-1.3
1,968,678	-		PS417_09040	0.76	+1.8
1,968,863	+				-0.5
1,968,863	+				+0.3
1,969,327	-		PS417_09045	0.32	-3.0
1,969,454	-		PS417_09045	0.45	-1.9
1,969,454	-		PS417_09045	0.45	-2.7
1,969,647	-		PS417_09045	0.63	-2.7
1,969,777	+		PS417_09045	0.76	+1.2