Strain Fitness in Pseudomonas simiae WCS417 around PS417_08805

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,915,326	+		PS417_08800	0.61	+3.0
1,915,655	-				+0.4
1,915,697	-				+1.6
1,915,700	+				-0.6
1,915,700	+				-0.1
1,915,701	-				+0.3
1,915,701	-				+0.3
1,915,756	-				-0.5
1,915,900	-				+1.9
1,916,082	+		PS417_08805	0.31	+4.2
1,916,082	+		PS417_08805	0.31	-1.3
1,916,083	-		PS417_08805	0.31	+0.7
1,916,092	-				+2.7
1,916,160	+		PS417_08805	0.41	+0.3
1,916,160	+		PS417_08805	0.41	+0.5
1,916,160	+		PS417_08805	0.41	+0.7
1,916,160	+				+1.9
1,916,161	-		PS417_08805	0.41	-0.2
1,916,238	+		PS417_08805	0.51	+0.0
1,916,520	+		PS417_08805	0.87	-0.5
1,916,521	-		PS417_08805	0.87	-0.1
1,916,521	-		PS417_08805	0.87	+1.0
1,916,584	+				+2.0
1,916,620	+				-1.3
1,916,645	-				-0.4
1,916,726	+				-0.1
1,916,880	+		PS417_08810	0.14	+0.3
1,916,881	-		PS417_08810	0.14	+1.4
1,916,888	-		PS417_08810	0.14	+1.3
1,916,984	-		PS417_08810	0.20	-1.1
1,917,010	+		PS417_08810	0.21	+0.3
1,917,010	+		PS417_08810	0.21	-0.5
1,917,010	+		PS417_08810	0.21	+1.1
1,917,010	+		PS417_08810	0.21	-3.5
1,917,010	+		PS417_08810	0.21	+0.2
1,917,010	+		PS417_08810	0.21	-0.0
1,917,067	+		PS417_08810	0.25	+0.5
1,917,241	+		PS417_08810	0.34	-0.6
1,917,241	+		PS417_08810	0.34	+0.1
1,917,242	-		PS417_08810	0.34	+0.7
1,917,533	-		PS417_08810	0.51	-3.2