Strain Fitness in Pseudomonas simiae WCS417 around PS417_08615

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,882,171	-		PS417_08610	0.45	+1.0
1,882,177	+		PS417_08610	0.45	-1.6
1,882,178	-		PS417_08610	0.45	+0.1
1,882,200	+		PS417_08610	0.47	+0.5
1,882,200	+		PS417_08610	0.47	+0.3
1,882,200	+		PS417_08610	0.47	+2.2
1,882,380	+		PS417_08610	0.61	+0.9
1,882,380	+		PS417_08610	0.61	+1.6
1,882,380	+		PS417_08610	0.61	-2.0
1,882,381	-		PS417_08610	0.61	-1.3
1,882,381	-		PS417_08610	0.61	-1.7
1,882,381	-		PS417_08610	0.61	-0.1
1,882,414	-		PS417_08610	0.63	+0.6
1,882,487	-		PS417_08610	0.69	-0.7
1,882,801	+				+0.1
1,882,801	+				-1.5
1,882,801	+				+1.4
1,882,802	-				+1.3
1,882,804	+				-0.2
1,882,804	+				+0.5
1,882,804	+				-0.9
1,882,804	+				-1.1
1,883,051	+				-0.0
1,883,052	-				-0.6
1,883,130	-		PS417_08615	0.13	+0.1
1,883,136	-		PS417_08615	0.14	+1.9
1,883,244	-		PS417_08615	0.23	-0.5
1,883,475	-		PS417_08615	0.43	+0.5
1,883,482	+		PS417_08615	0.44	+0.9
1,883,483	-		PS417_08615	0.44	+1.2
1,883,483	-		PS417_08615	0.44	-0.1
1,883,483	-		PS417_08615	0.44	+1.0
1,884,149	+				+0.9
1,884,149	+				+0.3
1,884,150	-				+0.5
1,884,421	+		PS417_08620	0.56	-2.9
1,884,686	+		PS417_08625	0.31	-2.3
1,884,687	-		PS417_08625	0.31	+0.1