Strain Fitness in Pseudomonas simiae WCS417 around PS417_08395

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,839,180	+		PS417_08385	0.68	+1.2
1,839,181	-		PS417_08385	0.68	+0.2
1,839,181	-		PS417_08385	0.68	-1.3
1,839,181	-		PS417_08385	0.68	+0.7
1,839,456	-				+1.0
1,839,488	-				-0.3
1,839,488	-				-0.5
1,839,502	-				+0.4
1,839,502	-				+0.5
1,839,519	+				-0.9
1,839,575	+				-1.7
1,839,576	-				+0.4
1,839,576	-				+1.7
1,839,576	-				+0.3
1,839,660	+		PS417_08390	0.12	+0.8
1,839,660	+		PS417_08390	0.12	-3.6
1,839,831	+		PS417_08390	0.48	-0.5
1,839,831	+		PS417_08390	0.48	+1.3
1,839,831	+		PS417_08390	0.48	+0.1
1,839,832	-		PS417_08390	0.48	-0.5
1,839,832	-		PS417_08390	0.48	-0.3
1,839,925	-		PS417_08390	0.68	-1.2
1,839,936	+		PS417_08390	0.70	-0.2
1,839,951	+		PS417_08390	0.73	-0.8
1,839,951	+		PS417_08390	0.73	+0.9
1,839,951	+		PS417_08390	0.73	-0.7
1,840,000	+		PS417_08390	0.84	+0.2
1,840,066	-				-1.7
1,840,098	+				+0.9
1,840,200	+				-0.2
1,840,264	+				+0.8
1,840,264	+				-1.8
1,840,486	+		PS417_08395	0.14	-1.6
1,840,486	+		PS417_08395	0.14	-2.7
1,840,486	+		PS417_08395	0.14	-0.7
1,840,487	-		PS417_08395	0.15	+0.4
1,840,487	-		PS417_08395	0.15	-1.6
1,840,618	+		PS417_08395	0.20	+0.1
1,840,633	+		PS417_08395	0.20	-2.1
1,840,633	+		PS417_08395	0.20	-2.0
1,840,634	-		PS417_08395	0.20	+0.3
1,840,634	-		PS417_08395	0.20	-1.8
1,840,982	+		PS417_08395	0.34	+0.7
1,841,425	+		PS417_08395	0.52	-2.0
1,841,617	+		PS417_08395	0.60	-0.1
1,841,618	-		PS417_08395	0.60	+4.5
1,841,618	-		PS417_08395	0.60	-1.3
1,841,947	+		PS417_08395	0.73	-0.4
1,842,499	+				+0.5
1,842,499	+				-3.6
1,842,499	+				+0.7
1,842,500	-				+0.2
1,843,283	-				+0.2
1,843,391	+		PS417_08405	0.11	-0.2
1,843,413	-		PS417_08405	0.14	-0.3
1,843,415	+		PS417_08405	0.15	+0.3
1,843,415	+		PS417_08405	0.15	-0.8
1,843,415	+		PS417_08405	0.15	+0.9
1,843,416	-		PS417_08405	0.15	-0.1
1,843,577	+		PS417_08405	0.41	-0.8
1,843,577	+		PS417_08405	0.41	+0.2
1,843,577	+		PS417_08405	0.41	-1.5
1,843,578	-		PS417_08405	0.42	-0.1
1,843,578	-		PS417_08405	0.42	-0.3