Strain Fitness in Pseudomonas simiae WCS417 around PS417_08325

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,822,249	+				-1.1
1,822,249	+				-1.1
1,822,249	+				-0.1
1,822,249	+		PS417_08315	0.89	-0.8
1,822,250	-		PS417_08315	0.90	-1.2
1,822,250	-		PS417_08315	0.90	+0.5
1,822,250	-		PS417_08315	0.90	+0.6
1,822,252	-				-0.7
1,822,372	+				-1.3
1,822,372	+				-0.3
1,822,373	-				+0.5
1,822,379	-				+0.5
1,822,573	-		PS417_08320	0.33	-0.7
1,822,883	+		PS417_08320	0.73	+0.9
1,822,883	+		PS417_08320	0.73	+2.4
1,822,883	+		PS417_08320	0.73	+0.6
1,823,108	+				+1.9
1,823,137	+				-0.5
1,823,183	+				+0.3
1,823,385	+		PS417_08325	0.26	-0.3
1,823,385	+		PS417_08325	0.26	-1.3
1,823,470	+		PS417_08325	0.37	+0.4
1,823,470	+		PS417_08325	0.37	-0.0
1,823,470	+		PS417_08325	0.37	+1.9
1,823,471	-		PS417_08325	0.37	+0.7
1,823,471	-		PS417_08325	0.37	-0.4
1,823,568	+				+1.9
1,823,569	-		PS417_08325	0.49	+3.7
1,823,569	-		PS417_08325	0.49	-0.0
1,823,648	+		PS417_08325	0.59	+0.6
1,823,720	+		PS417_08325	0.68	+1.1
1,824,020	+		PS417_08330	0.12	+0.3
1,824,020	+		PS417_08330	0.12	-2.8
1,824,021	-		PS417_08330	0.13	-0.5
1,824,119	-		PS417_08330	0.40	+1.0
1,824,291	+		PS417_08330	0.87	-0.6
1,824,295	+		PS417_08330	0.88	-3.6
1,824,295	+		PS417_08330	0.88	+0.7
1,824,380	+				-0.2
1,824,380	+				-3.3
1,824,380	+				-0.0
1,824,381	-				+1.1
1,824,428	+				-1.0
1,824,509	+				-0.1
1,824,509	+				-1.1
1,824,547	-				-0.3
1,824,551	+				+1.5
1,824,552	-				+0.1
1,824,552	-				-0.7
1,824,618	+		PS417_08335	0.27	+0.1
1,824,618	+				-0.1
1,824,619	-		PS417_08335	0.28	-0.8
1,824,636	-		PS417_08335	0.34	-0.9
1,824,718	-		PS417_08335	0.62	-2.8
1,824,857	-				+0.3
1,824,891	+				+0.1
1,824,892	-				-1.0
1,824,892	-				-0.2
1,824,892	-				-0.2
1,824,892	-				-0.2
1,824,937	-				+0.5