Strain Fitness in Pseudomonas simiae WCS417 around PS417_08090

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,768,810	+		PS417_08085	0.45	-1.1
1,768,983	+		PS417_08085	0.56	-1.5
1,768,983	+				-0.9
1,768,984	-		PS417_08085	0.56	-0.0
1,768,984	-		PS417_08085	0.56	-1.5
1,768,984	-				-0.1
1,769,040	-		PS417_08085	0.60	+1.4
1,769,060	+		PS417_08085	0.61	-0.3
1,769,061	-		PS417_08085	0.61	+0.1
1,769,066	+		PS417_08085	0.62	-3.5
1,769,066	+		PS417_08085	0.62	-0.2
1,769,094	-		PS417_08085	0.64	-0.2
1,769,180	+		PS417_08085	0.69	-0.1
1,769,180	+		PS417_08085	0.69	-0.0
1,769,180	+		PS417_08085	0.69	-1.8
1,769,180	+		PS417_08085	0.69	-0.4
1,769,180	+		PS417_08085	0.69	-1.9
1,769,181	-		PS417_08085	0.69	+0.4
1,769,318	+		PS417_08085	0.78	-1.3
1,769,323	+		PS417_08085	0.79	+0.7
1,769,323	+		PS417_08085	0.79	+0.5
1,769,336	+		PS417_08085	0.80	-0.8
1,769,336	+		PS417_08085	0.80	-3.3
1,769,336	+		PS417_08085	0.80	+0.4
1,769,336	+		PS417_08085	0.80	+1.9
1,769,337	-		PS417_08085	0.80	+0.3
1,769,337	-		PS417_08085	0.80	+1.6
1,769,337	-		PS417_08085	0.80	+1.3
1,769,408	+		PS417_08085	0.84	+0.7
1,769,409	-		PS417_08085	0.84	+0.8
1,769,409	-		PS417_08085	0.84	+0.7
1,769,409	-		PS417_08085	0.84	+0.1
1,769,409	-		PS417_08085	0.84	-2.5
1,769,409	-				-1.5
1,769,495	+				-3.6
1,769,496	-				-1.5
1,769,496	-				+0.2
1,769,546	+				-1.3
1,769,546	+				-1.0
1,769,547	-				-1.0
1,769,547	-				-0.1
1,769,549	+				+0.3
1,769,550	-				-1.4
1,769,550	-				-0.9
1,769,558	+				-1.4
1,769,559	-				-0.5
1,769,631	+				-3.4
1,769,632	-				-1.8
1,769,632	-				+0.6
1,769,632	-				+0.5
1,769,632	-				-0.7
1,769,642	+				-1.0
1,769,642	+				+0.3
1,769,643	-				+1.3
1,769,643	-				+0.9
1,769,714	+				-1.9
1,769,714	+				+0.6
1,769,714	+				+1.5
1,769,714	+				+0.6
1,769,715	-				-1.8
1,769,715	-				-0.1
1,769,715	-				-2.2
1,769,715	-				-0.1
1,769,715	-				-0.4
1,769,761	+				+4.0
1,769,761	+				+0.3
1,769,837	+				+0.9
1,769,837	+				+1.9
1,770,362	+		PS417_08090	0.78	-2.4
1,770,513	-				-2.7
1,770,523	-				-0.8
1,770,527	-				-0.6
1,770,527	-				+0.5
1,770,550	+				-0.4
1,770,612	-				-2.0
1,770,621	+				-0.1
1,770,621	+				-1.7
1,770,621	+				+0.9
1,770,621	+				-0.4
1,770,622	-				-0.7
1,770,622	-				-0.2
1,770,622	-				-3.1
1,770,622	-				-0.4
1,770,701	+				+1.9
1,770,702	-				+1.7
1,770,727	+				-2.3
1,770,855	+		PS417_08095	0.23	-0.1
1,771,139	+		PS417_08095	0.65	-1.8