Strain Fitness in Pseudomonas simiae WCS417 around PS417_07980

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,746,178	+				-1.1
1,746,318	-				-0.1
1,746,318	-				-1.2
1,746,345	+				+0.7
1,746,346	-				-0.5
1,746,353	+		PS417_07970	0.12	+0.3
1,746,353	+		PS417_07970	0.12	-0.8
1,746,353	+		PS417_07970	0.12	-2.7
1,746,353	+		PS417_07970	0.12	-1.0
1,746,353	+		PS417_07970	0.12	-0.1
1,746,353	+		PS417_07970	0.12	-0.6
1,746,354	-		PS417_07970	0.12	-0.9
1,746,445	+		PS417_07970	0.37	+0.3
1,746,445	+		PS417_07970	0.37	-4.1
1,746,446	-		PS417_07970	0.37	-0.1
1,746,446	-		PS417_07970	0.37	+1.3
1,746,511	+		PS417_07970	0.55	+1.5
1,746,517	+		PS417_07970	0.57	-1.6
1,746,518	-		PS417_07970	0.57	+0.6
1,746,518	-		PS417_07970	0.57	-0.8
1,746,519	+		PS417_07970	0.57	-0.9
1,746,519	+		PS417_07970	0.57	-0.7
1,746,519	+		PS417_07970	0.57	+0.4
1,746,519	+				-1.3
1,746,519	+		PS417_07970	0.57	+1.4
1,746,519	+		PS417_07970	0.57	+1.3
1,746,519	+		PS417_07970	0.57	+0.5
1,746,520	-		PS417_07970	0.57	-0.9
1,746,520	-		PS417_07970	0.57	-1.2
1,746,520	-		PS417_07970	0.57	+0.3
1,746,520	-		PS417_07970	0.57	+0.3
1,746,520	-		PS417_07970	0.57	-0.3
1,746,520	-		PS417_07970	0.57	+1.7
1,746,520	-		PS417_07970	0.57	+0.0
1,746,520	-		PS417_07970	0.57	+0.9
1,746,520	-		PS417_07970	0.57	-0.4
1,746,520	-		PS417_07970	0.57	-1.8
1,746,521	+		PS417_07970	0.58	+1.5
1,746,521	+				-1.5
1,746,521	+		PS417_07970	0.58	-1.9
1,746,521	+		PS417_07970	0.58	+0.6
1,746,521	+		PS417_07970	0.58	+1.1
1,746,521	+		PS417_07970	0.58	-3.0
1,746,521	+		PS417_07970	0.58	-0.2
1,746,522	-		PS417_07970	0.58	-2.1
1,746,522	-		PS417_07970	0.58	-2.0
1,746,522	-		PS417_07970	0.58	-1.5
1,746,522	-		PS417_07970	0.58	+0.1
1,746,522	-		PS417_07970	0.58	+1.7
1,746,559	+		PS417_07970	0.68	-1.9
1,746,559	+		PS417_07970	0.68	-0.2
1,746,559	+		PS417_07970	0.68	-3.8
1,746,560	-		PS417_07970	0.68	-0.5
1,746,560	-		PS417_07970	0.68	-0.7
1,746,560	-		PS417_07970	0.68	+0.4
1,746,607	+		PS417_07970	0.81	-1.9
1,746,634	-		PS417_07970	0.89	-0.9
1,746,634	-		PS417_07970	0.89	+0.8
1,746,644	-				+0.1
1,746,684	-				+0.7
1,746,838	+		PS417_07975	0.42	-0.5
1,747,187	-		PS417_07980	0.15	-2.3
1,747,187	-		PS417_07980	0.15	-1.6
1,747,225	+		PS417_07980	0.24	-0.5
1,747,225	+		PS417_07980	0.24	+0.9
1,747,225	+		PS417_07980	0.24	-0.3
1,747,509	-				-2.9
1,747,636	+		PS417_07985	0.45	+0.6
1,747,834	+				+0.5
1,747,855	+				+1.7
1,747,856	-				-3.2
1,747,869	+				+0.8
1,747,869	+				-2.4
1,747,869	+				+1.2
1,747,924	+				+0.5
1,747,924	+				-2.0
1,747,924	+				+2.3
1,747,925	-				-2.9
1,747,931	+				-2.4
1,747,932	-				+0.1
1,747,932	-				-1.1
1,747,932	-				-1.4
1,747,932	-				+2.2
1,748,026	-		PS417_07990	0.24	-0.0
1,748,119	+		PS417_07990	0.48	+0.3
1,748,120	-		PS417_07990	0.48	+0.3
1,748,169	+		PS417_07990	0.60	+0.3
1,748,169	+		PS417_07990	0.60	-3.2
1,748,169	+		PS417_07990	0.60	-0.1
1,748,169	+		PS417_07990	0.60	+0.1
1,748,169	+		PS417_07990	0.60	-0.7
1,748,170	-		PS417_07990	0.61	-1.3
1,748,354	+				-0.1
1,748,354	+				-1.3
1,748,354	+				+2.7
1,748,355	-				-1.3
1,748,404	+				-2.5
1,748,405	-				-3.0
1,748,494	+		PS417_07995	0.12	-2.4
1,748,494	+		PS417_07995	0.12	-1.0
1,748,495	-		PS417_07995	0.12	-0.3