Strain Fitness in Pseudomonas simiae WCS417 around PS417_07165

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,582,217	-		PS417_07155	0.78	+3.0
1,582,217	-		PS417_07155	0.78	-2.5
1,582,217	-				+0.2
1,582,217	-		PS417_07155	0.78	+0.3
1,582,217	-		PS417_07155	0.78	-2.4
1,582,217	-		PS417_07155	0.78	-0.3
1,582,331	+				-0.6
1,582,331	+				-1.5
1,582,331	+				-2.3
1,582,331	+				+2.4
1,582,332	-				+0.6
1,582,332	-				-0.1
1,582,332	-				-0.2
1,582,493	+		PS417_07160	0.29	-3.5
1,582,493	+		PS417_07160	0.29	-1.3
1,582,589	+		PS417_07160	0.46	+1.3
1,582,589	+		PS417_07160	0.46	-0.8
1,582,589	+		PS417_07160	0.46	+0.9
1,582,589	+		PS417_07160	0.46	+0.5
1,582,589	+		PS417_07160	0.46	-0.9
1,582,589	+		PS417_07160	0.46	+0.1
1,582,590	-		PS417_07160	0.46	-0.3
1,582,590	-		PS417_07160	0.46	-0.3
1,582,590	-		PS417_07160	0.46	+0.2
1,582,590	-		PS417_07160	0.46	+0.3
1,582,594	+		PS417_07160	0.47	-1.0
1,582,594	+		PS417_07160	0.47	+0.3
1,582,594	+		PS417_07160	0.47	+0.7
1,582,599	-		PS417_07160	0.48	-1.1
1,582,599	-		PS417_07160	0.48	-2.6
1,582,599	-		PS417_07160	0.48	-0.9
1,582,599	-		PS417_07160	0.48	-1.6
1,582,901	+				-0.8
1,583,126	+				+0.8
1,583,127	-				-0.2
1,583,178	+				-1.4
1,583,482	+		PS417_07165	0.36	-1.3
1,583,509	+		PS417_07165	0.39	-0.7
1,583,509	+		PS417_07165	0.39	-1.6
1,583,560	+		PS417_07165	0.45	+0.8
1,583,909	+		PS417_07165	0.85	-1.6
1,583,910	+		PS417_07165	0.85	-1.8
1,584,185	+		PS417_07170	0.11	-0.6
1,584,288	+		PS417_07170	0.20	-2.1
1,584,545	-		PS417_07170	0.43	+0.1
1,584,599	+		PS417_07170	0.48	+0.5
1,584,615	+		PS417_07170	0.50	-0.9
1,584,781	-		PS417_07170	0.65	+2.3
1,584,908	-		PS417_07170	0.76	-2.5
1,584,908	-		PS417_07170	0.76	+0.0
1,584,937	-		PS417_07170	0.79	+0.8
1,584,940	-		PS417_07170	0.79	+0.6