Strain Fitness in Pseudomonas simiae WCS417 around PS417_07080

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,565,803	-				-1.6
1,565,803	-				-0.5
1,565,916	+		PS417_07075	0.18	-1.0
1,565,946	+		PS417_07075	0.21	-1.2
1,566,172	-		PS417_07075	0.44	-0.2
1,566,496	-		PS417_07075	0.77	-4.8
1,566,525	+		PS417_07075	0.80	+0.5
1,566,526	-		PS417_07075	0.80	-0.3
1,566,706	+				-2.1
1,566,707	-				-0.9
1,566,729	-				-3.3
1,566,746	+				+0.2
1,566,747	-				-0.3
1,566,756	+				+1.9
1,566,757	-				-0.1
1,566,759	+				+0.1
1,566,775	+				-0.9
1,566,777	+				-3.6
1,566,777	+				+0.1
1,566,777	+				-0.3
1,566,778	-				-1.9
1,566,778	-				+1.5
1,566,778	-				-1.7
1,566,819	+				-1.6
1,566,831	+				-1.9
1,566,831	+				-0.6
1,566,831	+				+0.1
1,566,832	-				+0.1
1,566,889	-		PS417_07080	0.10	-1.8
1,566,889	-		PS417_07080	0.10	+0.2
1,566,889	-		PS417_07080	0.10	-0.7
1,566,889	-		PS417_07080	0.10	-0.2
1,566,889	-		PS417_07080	0.10	+0.8
1,566,889	-		PS417_07080	0.10	-1.0
1,566,889	-		PS417_07080	0.10	-0.7
1,566,889	-		PS417_07080	0.10	+0.2
1,567,068	-				+0.8
1,567,083	+		PS417_07080	0.25	-1.7
1,567,084	-		PS417_07080	0.25	-0.1
1,567,084	-		PS417_07080	0.25	+2.0
1,567,105	-		PS417_07080	0.27	-0.1
1,567,105	-		PS417_07080	0.27	-1.3
1,567,154	-		PS417_07080	0.31	-1.2
1,567,154	-		PS417_07080	0.31	-0.1
1,567,154	-		PS417_07080	0.31	-0.1
1,567,170	+		PS417_07080	0.32	-2.0
1,567,171	-		PS417_07080	0.32	+0.9
1,567,171	-		PS417_07080	0.32	-1.9
1,567,344	+		PS417_07080	0.45	+0.1
1,567,344	+		PS417_07080	0.45	-0.8
1,567,458	+		PS417_07080	0.54	-2.0
1,567,458	+		PS417_07080	0.54	+0.6
1,567,508	+		PS417_07080	0.58	+0.1
1,567,509	-		PS417_07080	0.58	+0.7
1,567,893	+		PS417_07080	0.88	-3.7
1,567,893	+		PS417_07080	0.88	-1.2
1,567,893	+		PS417_07080	0.88	-0.3
1,567,921	+				+2.8
1,568,058	+				+1.0
1,568,059	-				+0.6
1,568,076	-				-1.0
1,568,076	-				-1.5
1,568,076	-				-1.2
1,568,076	-				-3.5
1,568,076	-				-0.2
1,568,137	+				-0.8
1,568,137	+				+2.8
1,568,138	-				-2.8
1,568,138	-				+1.3
1,568,138	-				-1.8
1,568,138	-				+0.7
1,568,147	+				+1.5
1,568,147	+				+1.0
1,568,148	-				+1.8
1,568,277	-				+1.3
1,568,684	+		PS417_07085	0.59	-0.8
1,568,685	-		PS417_07085	0.60	-0.1
1,568,861	+				-1.3
1,568,862	-		PS417_07085	0.86	+0.2
1,568,862	-		PS417_07085	0.86	-1.1
1,568,930	+				-0.5
1,568,954	+				-0.3
1,568,954	+				-0.4
1,568,954	+				-0.5
1,568,955	-				+0.1
1,568,955	-				-0.5
1,569,040	-				-1.3