Strain Fitness in Pseudomonas simiae WCS417 around PS417_06960

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,538,660	+				-2.9
1,539,070	+		PS417_06955	0.35	-0.6
1,539,070	+		PS417_06955	0.35	-1.0
1,539,070	+		PS417_06955	0.35	-1.5
1,539,070	+		PS417_06955	0.35	-1.4
1,539,230	-		PS417_06955	0.65	-0.6
1,539,302	+		PS417_06955	0.79	-0.9
1,539,386	-				+0.4
1,539,390	+				-2.1
1,539,426	+				+0.9
1,539,653	+		PS417_06960	0.43	+0.2
1,539,653	+		PS417_06960	0.43	+0.2
1,539,653	+		PS417_06960	0.43	-1.9
1,539,654	-		PS417_06960	0.43	-0.8
1,539,654	-		PS417_06960	0.43	+0.0
1,539,654	-		PS417_06960	0.43	-0.8
1,539,674	-		PS417_06960	0.48	-0.4
1,539,751	+		PS417_06960	0.66	+0.6
1,539,752	-		PS417_06960	0.66	+2.1
1,539,752	-		PS417_06960	0.66	+0.7
1,539,752	-		PS417_06960	0.66	-1.5
1,539,962	+				+0.6
1,540,299	+		PS417_06965	0.64	+0.5
1,540,299	+		PS417_06965	0.64	-2.5
1,540,353	+		PS417_06965	0.74	-1.0
1,540,354	-		PS417_06965	0.75	-0.3
1,540,468	-				+2.1
1,540,505	+				-0.2
1,540,516	+				-0.8
1,540,517	-				+1.5
1,540,541	+				-0.1
1,540,542	-				+1.1
1,540,542	-				+0.8
1,540,633	-				+0.8
1,540,654	-				-1.5
1,540,690	-				-1.5
1,540,809	+		PS417_06970	0.14	+0.9
1,540,810	-		PS417_06970	0.14	+0.2