Strain Fitness in Pseudomonas simiae WCS417 around PS417_06750

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,492,937	-		PS417_06745	0.13	-0.8
1,492,999	+		PS417_06745	0.20	-1.1
1,493,782	+				-1.1
1,493,847	+				-0.9
1,493,847	+				-1.9
1,493,847	+				-0.1
1,493,848	-				+1.2
1,493,848	-				+1.1
1,493,848	-				-1.5
1,493,943	-				-1.0
1,494,036	+		PS417_06750	0.13	-1.4
1,494,036	+		PS417_06750	0.13	-1.1
1,494,036	+		PS417_06750	0.13	+0.5
1,494,037	-		PS417_06750	0.13	-0.5
1,494,078	+		PS417_06750	0.16	+0.9
1,494,079	-		PS417_06750	0.16	-0.1
1,494,117	+		PS417_06750	0.19	+0.9
1,494,226	+		PS417_06750	0.26	+1.8
1,494,227	-		PS417_06750	0.26	+1.3
1,494,244	-		PS417_06750	0.27	+0.8
1,494,280	+		PS417_06750	0.29	+2.0
1,494,280	+		PS417_06750	0.29	+0.4
1,494,281	-		PS417_06750	0.30	-0.8
1,494,422	+		PS417_06750	0.39	+0.4
1,494,502	-		PS417_06750	0.44	-0.4
1,494,556	-		PS417_06750	0.48	-2.7
1,494,633	+		PS417_06750	0.53	-0.8
1,494,634	-		PS417_06750	0.53	-0.8
1,494,639	-		PS417_06750	0.53	+0.9
1,494,726	+		PS417_06750	0.59	+0.4
1,494,727	-		PS417_06750	0.59	+1.9
1,494,727	-		PS417_06750	0.59	+0.5
1,494,983	-		PS417_06750	0.76	+0.9
1,495,002	+		PS417_06750	0.78	+2.0
1,495,003	-		PS417_06750	0.78	+0.7
1,495,003	-		PS417_06750	0.78	-0.2
1,495,004	+		PS417_06750	0.78	+0.2
1,495,005	-		PS417_06750	0.78	+0.2
1,495,041	+		PS417_06750	0.80	-1.8
1,495,229	+				-1.8
1,495,229	+				-0.3
1,495,230	-				+1.0
1,495,262	-				-2.2
1,495,343	+				-1.3
1,495,343	+				+0.3
1,495,344	-				-2.1
1,495,353	-				-0.3
1,495,421	-				-1.0
1,495,421	-				+0.4
1,495,491	+				+0.5
1,495,560	+				-1.0
1,495,636	-		PS417_06755	0.16	-2.8
1,495,694	+		PS417_06755	0.21	+0.1
1,495,694	+		PS417_06755	0.21	-2.7
1,495,737	+		PS417_06755	0.25	+0.8
1,495,738	-		PS417_06755	0.25	-1.5
1,495,822	-		PS417_06755	0.31	-0.1
1,495,822	-		PS417_06755	0.31	-0.5
1,495,839	+		PS417_06755	0.33	+0.0
1,495,992	+		PS417_06755	0.45	-1.3
1,495,992	+		PS417_06755	0.45	+1.4
1,495,992	+		PS417_06755	0.45	+0.7
1,495,993	-		PS417_06755	0.45	-0.3