Strain Fitness in Pseudomonas simiae WCS417 around PS417_06720

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,487,385	+				-1.8
1,487,386	-				-2.2
1,487,386	-				-2.5
1,487,386	-				-0.7
1,487,389	-				+0.8
1,487,457	-				+0.6
1,487,457	-				+0.7
1,487,471	+				-3.2
1,487,930	+		PS417_06715	0.74	-0.3
1,487,930	+		PS417_06715	0.74	+0.5
1,487,930	+				+1.8
1,487,930	+		PS417_06715	0.74	-1.3
1,487,930	+		PS417_06715	0.74	+1.4
1,487,930	+		PS417_06715	0.74	-3.8
1,487,930	+		PS417_06715	0.74	-2.6
1,487,930	+		PS417_06715	0.74	-1.9
1,487,930	+		PS417_06715	0.74	-1.7
1,487,931	-		PS417_06715	0.75	-2.2
1,487,931	-		PS417_06715	0.75	-2.1
1,487,931	-		PS417_06715	0.75	+0.4
1,487,931	-		PS417_06715	0.75	+0.8
1,487,931	-		PS417_06715	0.75	+0.3
1,487,970	-		PS417_06715	0.80	+1.5
1,487,970	-		PS417_06715	0.80	+1.8
1,488,045	-				+0.1
1,488,150	+				+1.8
1,488,154	-				-0.1
1,488,309	+		PS417_06720	0.35	-2.0
1,488,309	+		PS417_06720	0.35	+1.1
1,488,309	+		PS417_06720	0.35	+0.4
1,488,309	+		PS417_06720	0.35	-0.9
1,488,310	-		PS417_06720	0.35	+2.0
1,488,310	-		PS417_06720	0.35	+0.4
1,488,310	-		PS417_06720	0.35	-0.1
1,488,310	-		PS417_06720	0.35	+0.0
1,488,310	-		PS417_06720	0.35	+0.2
1,488,405	-		PS417_06720	0.52	-1.0
1,488,463	+		PS417_06720	0.62	-0.1
1,488,464	-		PS417_06720	0.62	-0.2
1,488,467	-		PS417_06720	0.63	-2.5
1,488,467	-		PS417_06720	0.63	-2.0
1,488,585	-		PS417_06720	0.84	-3.2
1,488,619	-		PS417_06720	0.90	+0.3
1,488,619	-		PS417_06720	0.90	+0.3
1,488,738	-				+0.0
1,488,777	-				+0.7
1,488,777	-				+2.2
1,488,777	-				-2.3
1,488,787	+				-0.2
1,488,917	+				-1.1
1,488,918	-				-0.2
1,488,918	-				+0.6
1,488,918	-				-0.2
1,488,923	+				-0.1
1,488,924	-				+1.6
1,488,941	+				+0.8
1,488,942	-				-0.7
1,489,148	+		PS417_06725	0.26	+0.3
1,489,148	+		PS417_06725	0.26	-3.7
1,489,245	-		PS417_06725	0.33	-0.2
1,489,245	-		PS417_06725	0.33	-0.1
1,489,245	-		PS417_06725	0.33	-0.2
1,489,298	+		PS417_06725	0.37	-0.2
1,489,302	+		PS417_06725	0.38	-1.7
1,489,303	-		PS417_06725	0.38	-0.7
1,489,598	+		PS417_06725	0.60	+0.5
1,489,598	+		PS417_06725	0.60	+0.5
1,489,598	+		PS417_06725	0.60	-0.4
1,489,599	-		PS417_06725	0.60	-0.4
1,489,599	-		PS417_06725	0.60	-2.8
1,489,652	+		PS417_06725	0.65	-1.9
1,489,652	+		PS417_06725	0.65	-1.2
1,489,652	+		PS417_06725	0.65	-0.3
1,489,653	-		PS417_06725	0.65	-0.4
1,489,653	-		PS417_06725	0.65	-1.7
1,489,653	-		PS417_06725	0.65	-2.2