Strain Fitness in Pseudomonas simiae WCS417 around PS417_06710

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,485,255	-		PS417_06700	0.82	-1.4
1,485,255	-		PS417_06700	0.82	-1.5
1,485,278	+				+0.2
1,485,339	-				-0.7
1,485,404	+				-0.6
1,485,405	-				-1.7
1,485,405	-				-3.0
1,485,412	+				-0.4
1,485,765	+		PS417_06705	0.46	-0.3
1,485,770	+		PS417_06705	0.47	+0.3
1,485,770	+		PS417_06705	0.47	-0.3
1,485,771	-		PS417_06705	0.47	+1.9
1,485,771	-		PS417_06705	0.47	+0.6
1,486,196	-				+1.5
1,486,196	-				+0.7
1,486,200	-				-0.1
1,486,200	-				-2.3
1,486,595	+		PS417_06710	0.34	-0.9
1,486,705	-		PS417_06710	0.43	-2.7
1,487,385	+				-1.8
1,487,386	-				-2.2
1,487,386	-				-2.5
1,487,386	-				-0.7
1,487,389	-				+0.8
1,487,457	-				+0.6
1,487,457	-				+0.7
1,487,471	+				-3.2
1,487,930	+		PS417_06715	0.74	-0.3
1,487,930	+		PS417_06715	0.74	+0.5
1,487,930	+				+1.8
1,487,930	+		PS417_06715	0.74	-1.3
1,487,930	+		PS417_06715	0.74	+1.4
1,487,930	+		PS417_06715	0.74	-3.8
1,487,930	+		PS417_06715	0.74	-2.6
1,487,930	+		PS417_06715	0.74	-1.9
1,487,930	+		PS417_06715	0.74	-1.7
1,487,931	-		PS417_06715	0.75	-2.2
1,487,931	-		PS417_06715	0.75	-2.1
1,487,931	-		PS417_06715	0.75	+0.4
1,487,931	-		PS417_06715	0.75	+0.8
1,487,931	-		PS417_06715	0.75	+0.3
1,487,970	-		PS417_06715	0.80	+1.5
1,487,970	-		PS417_06715	0.80	+1.8
1,488,045	-				+0.1
1,488,150	+				+1.8
1,488,154	-				-0.1
1,488,309	+		PS417_06720	0.35	-2.0
1,488,309	+		PS417_06720	0.35	+1.1
1,488,309	+		PS417_06720	0.35	+0.4
1,488,309	+		PS417_06720	0.35	-0.9
1,488,310	-		PS417_06720	0.35	+2.0
1,488,310	-		PS417_06720	0.35	+0.4
1,488,310	-		PS417_06720	0.35	-0.1
1,488,310	-		PS417_06720	0.35	+0.0
1,488,310	-		PS417_06720	0.35	+0.2