Strain Fitness in Pseudomonas simiae WCS417 around PS417_06540

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,448,366	+				-0.8
1,449,096	+				+3.3
1,449,096	+				-0.1
1,449,132	-				+1.2
1,449,143	-				-1.9
1,449,143	-				+0.4
1,449,155	+				+1.9
1,449,155	+				-0.5
1,449,156	-				+0.6
1,449,156	-				+0.6
1,449,197	-				+0.2
1,449,197	-				-0.6
1,449,199	+				-1.0
1,449,199	+				+2.8
1,449,261	+				-0.2
1,449,291	+				+0.2
1,449,292	-				-2.2
1,449,292	-				+0.5
1,449,298	-				+0.7
1,449,298	-				+0.7
1,449,298	-				-1.0
1,449,298	-				-0.2
1,449,309	-				+1.1
1,449,309	-				+1.1
1,449,459	+		PS417_06540	0.36	-3.4
1,449,459	+		PS417_06540	0.36	-0.8
1,449,623	+		PS417_06540	0.71	-0.8
1,449,735	+				-2.1
1,449,735	+				-0.7
1,449,736	-				-2.2
1,449,736	-				-0.9
1,449,736	-				-0.2
1,449,736	-				-2.7
1,449,738	+				-0.8
1,449,739	-				-0.4
1,449,773	+				+3.6
1,449,814	+				-0.1
1,449,815	-				-1.2
1,449,868	+				-1.7
1,449,869	-				+1.1
1,449,947	-				+1.0
1,449,950	-				-3.0
1,449,950	-				+0.3
1,450,045	+				-3.5
1,450,073	-				-0.5
1,450,128	-				-1.6
1,450,140	-				+1.5
1,450,193	+				-0.2
1,450,194	-				+2.3
1,450,194	-				-0.3
1,450,296	+				+0.4
1,450,297	-				+0.2
1,450,297	-				+0.6
1,450,322	+				-2.6
1,450,322	+				+1.4
1,450,343	+				-0.9
1,450,344	-				-0.4
1,450,357	+				+0.7
1,450,377	+				-0.2
1,450,390	+				-1.0
1,450,391	-				+0.9
1,450,450	-				+0.9
1,450,450	-				+0.6