Strain Fitness in Pseudomonas simiae WCS417 around PS417_05755

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,286,521	+		PS417_05740	0.58	-0.1
1,286,532	-				-0.8
1,286,532	-		PS417_05740	0.59	+0.1
1,286,532	-		PS417_05740	0.59	+2.6
1,286,532	-		PS417_05740	0.59	+2.0
1,286,618	+		PS417_05740	0.70	-1.0
1,286,619	-		PS417_05740	0.70	-0.6
1,286,619	-		PS417_05740	0.70	-0.4
1,286,635	+				+1.8
1,286,636	-		PS417_05740	0.72	-4.6
1,286,639	+		PS417_05740	0.73	-2.9
1,286,639	+		PS417_05740	0.73	-1.8
1,286,640	-		PS417_05740	0.73	-2.2
1,286,640	-		PS417_05740	0.73	+0.4
1,286,640	-		PS417_05740	0.73	-0.9
1,286,640	-		PS417_05740	0.73	+1.0
1,286,641	+				+1.8
1,286,641	+		PS417_05740	0.73	-1.5
1,286,808	-				+0.0
1,286,852	+				+0.4
1,286,875	+				+0.1
1,286,960	-		PS417_05745	0.35	-0.6
1,286,988	-		PS417_05745	0.45	+0.1
1,287,008	+		PS417_05745	0.51	-2.5
1,287,009	-		PS417_05745	0.51	-0.5
1,287,030	+		PS417_05745	0.58	+0.4
1,287,030	+		PS417_05745	0.58	+0.4
1,287,031	-				+2.4
1,287,031	-		PS417_05745	0.59	-0.8
1,287,032	+		PS417_05745	0.59	-0.5
1,287,032	+		PS417_05745	0.59	-0.4
1,287,033	-		PS417_05745	0.59	-1.5
1,287,069	+		PS417_05745	0.71	+0.2
1,287,070	-		PS417_05745	0.72	-0.5
1,287,149	+				-1.2
1,287,150	-				+0.2
1,287,434	+				+0.5
1,287,435	-				+1.7
1,287,435	-				+0.3
1,287,646	-		PS417_05755	0.19	-4.0
1,287,678	+		PS417_05755	0.22	+0.2
1,287,679	-		PS417_05755	0.22	+0.9
1,287,836	+		PS417_05755	0.36	+0.3
1,287,962	-		PS417_05755	0.46	-0.9
1,287,962	-		PS417_05755	0.46	-0.4
1,287,962	-		PS417_05755	0.46	-2.2
1,288,006	-		PS417_05755	0.50	+0.1
1,288,140	+		PS417_05755	0.62	-0.5
1,288,141	-		PS417_05755	0.62	-2.7
1,288,197	+		PS417_05755	0.67	-1.8
1,288,197	+		PS417_05755	0.67	-2.4
1,288,198	-		PS417_05755	0.67	-1.6
1,288,270	-		PS417_05755	0.73	-0.1
1,288,432	-				+0.2
1,288,432	-		PS417_05755	0.87	-0.9
1,288,464	+		PS417_05755	0.89	+0.6
1,288,530	+				+0.8
1,288,531	-				+0.4
1,288,531	-				+1.6
1,288,592	-				-0.2
1,288,592	-				-2.8
1,288,871	+		PS417_05760	0.56	-0.0
1,288,872	-		PS417_05760	0.56	+0.2
1,288,872	-		PS417_05760	0.56	-0.5
1,288,880	+		PS417_05760	0.58	-2.0
1,288,881	-		PS417_05760	0.58	+0.5
1,288,976	+		PS417_05760	0.77	-0.7
1,288,976	+		PS417_05760	0.77	-1.3
1,288,976	+		PS417_05760	0.77	-0.9
1,288,976	+		PS417_05760	0.77	+0.7
1,289,019	+		PS417_05760	0.85	+2.3
1,289,020	-		PS417_05760	0.86	-1.8
1,289,020	-		PS417_05760	0.86	+0.2
1,289,020	-		PS417_05760	0.86	-1.4
1,289,123	+				+1.3
1,289,124	-				-1.8
1,289,124	-				-0.7
1,289,140	-				+0.7
1,289,235	+		PS417_05765	0.16	+1.6
1,289,235	+		PS417_05765	0.16	+0.2
1,289,235	+		PS417_05765	0.16	-0.3
1,289,238	+		PS417_05765	0.16	+0.3
1,289,239	-		PS417_05765	0.16	-0.0
1,289,361	+		PS417_05765	0.38	-2.0
1,289,362	-		PS417_05765	0.38	+0.5
1,289,379	+		PS417_05765	0.41	+0.9
1,289,380	-		PS417_05765	0.41	+1.3
1,289,380	-		PS417_05765	0.41	+0.1
1,289,383	+		PS417_05765	0.42	-0.1
1,289,383	+		PS417_05765	0.42	+0.5
1,289,383	+		PS417_05765	0.42	+0.2
1,289,384	-		PS417_05765	0.42	-0.2
1,289,384	-		PS417_05765	0.42	+0.8