Strain Fitness in Pseudomonas simiae WCS417 around PS417_05560

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,249,782	+				-2.3
1,249,783	-				+0.1
1,249,872	+		PS417_05555	0.12	+0.7
1,249,872	+		PS417_05555	0.12	+1.0
1,249,873	-		PS417_05555	0.12	-1.8
1,250,062	-		PS417_05555	0.38	-1.7
1,250,325	+		PS417_05555	0.73	+0.6
1,250,455	-				+0.5
1,250,520	+				-1.7
1,250,521	-				+0.8
1,250,521	-				+1.1
1,250,556	+				-0.8
1,250,557	-				+0.5
1,250,557	-				+1.2
1,250,557	-				+1.0
1,250,652	-				+1.4
1,250,664	+				+1.8
1,250,664	+				-3.8
1,250,664	+				+0.8
1,250,665	-				+0.7
1,250,665	-				+0.4
1,250,668	-				+0.3
1,250,668	-				+0.4
1,250,668	-				-0.0
1,250,706	-				-0.8
1,250,712	-				-0.0
1,250,942	-		PS417_05560	0.24	-4.4
1,251,386	-		PS417_05560	0.72	-0.9
1,251,461	-		PS417_05560	0.80	-1.5
1,251,494	-				-0.5
1,251,494	-				-1.2
1,251,651	+				+1.6
1,251,652	-				-1.2
1,251,652	-				-3.2
1,251,652	-				+0.0
1,251,703	-				+0.5
1,251,703	-				-0.6
1,251,757	+				+0.2
1,251,800	-				+1.2
1,251,807	-				-1.6
1,251,866	+				-2.3
1,251,939	-				-1.4
1,251,943	+				-0.5