Strain Fitness in Pseudomonas simiae WCS417 around PS417_04695

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,039,944	+		PS417_04685	0.79	-0.2
1,039,945	-		PS417_04685	0.79	-1.2
1,039,950	+		PS417_04685	0.80	-1.7
1,039,950	+				+5.2
1,039,951	-		PS417_04685	0.80	+1.1
1,040,218	+				-2.8
1,040,218	+				+0.8
1,040,219	-				-0.5
1,040,245	+				-0.2
1,040,245	+				+0.0
1,040,245	+				-1.5
1,040,245	+				+0.8
1,040,246	-				+0.6
1,040,748	+		PS417_04690	0.78	-0.4
1,040,761	+		PS417_04690	0.80	+0.6
1,040,762	-		PS417_04690	0.80	+0.8
1,040,821	+		PS417_04690	0.89	-1.3
1,040,822	-		PS417_04690	0.89	+0.8
1,040,985	-				-1.7
1,040,990	+				+0.9
1,040,990	+				-0.6
1,040,990	+				-0.5
1,040,990	+				+0.0
1,040,991	-				+0.1
1,040,991	-				-0.8
1,040,991	-				-0.2
1,040,992	+				-0.4
1,040,993	-				-0.6
1,040,993	-				+0.6
1,041,174	-				-1.3
1,041,392	+		PS417_04695	0.15	+0.0
1,041,408	+		PS417_04695	0.16	-0.7
1,041,413	+		PS417_04695	0.16	-0.6
1,041,414	-		PS417_04695	0.16	-1.6
1,041,716	+		PS417_04695	0.26	+1.6
1,041,773	+		PS417_04695	0.27	-0.8
1,042,022	+		PS417_04695	0.35	-0.4
1,042,022	+		PS417_04695	0.35	+0.6
1,042,022	+		PS417_04695	0.35	-1.5
1,042,022	+		PS417_04695	0.35	+0.1
1,042,022	+		PS417_04695	0.35	+1.6
1,042,023	-		PS417_04695	0.36	-1.0
1,042,023	-		PS417_04695	0.36	-1.7
1,042,023	-		PS417_04695	0.36	-0.7
1,042,391	+		PS417_04695	0.47	-0.4
1,042,391	+		PS417_04695	0.47	-0.6
1,042,392	-		PS417_04695	0.47	+1.0
1,042,421	-		PS417_04695	0.48	+0.6
1,042,421	-		PS417_04695	0.48	+0.0
1,042,832	-		PS417_04695	0.62	-0.2
1,042,877	+		PS417_04695	0.63	-1.1
1,042,878	-		PS417_04695	0.63	-0.4
1,043,197	+		PS417_04695	0.73	-1.1
1,043,201	+		PS417_04695	0.74	+0.1
1,043,201	+		PS417_04695	0.74	-0.6
1,043,201	+		PS417_04695	0.74	-1.0
1,043,265	+		PS417_04695	0.76	-0.4
1,043,266	-		PS417_04695	0.76	+0.5
1,043,266	-		PS417_04695	0.76	-1.7
1,043,266	-		PS417_04695	0.76	-1.0
1,043,266	-		PS417_04695	0.76	-2.4
1,043,288	+		PS417_04695	0.76	-0.1
1,043,289	-		PS417_04695	0.76	-0.0
1,043,348	+		PS417_04695	0.78	-0.5
1,043,349	-		PS417_04695	0.78	+0.1
1,043,349	-		PS417_04695	0.78	-0.8
1,043,540	+		PS417_04695	0.85	-2.4
1,043,541	-		PS417_04695	0.85	-2.2
1,044,133	-		PS417_04700	0.10	+1.3
1,044,167	-		PS417_04700	0.13	-2.0
1,044,217	-		PS417_04700	0.18	+0.6
1,044,217	-		PS417_04700	0.18	-0.6
1,044,217	-		PS417_04700	0.18	-1.2
1,044,721	-		PS417_04700	0.61	+0.5
1,044,751	+		PS417_04700	0.63	-1.6
1,044,751	+		PS417_04700	0.63	+0.3
1,044,751	+		PS417_04700	0.63	+0.8
1,044,793	+		PS417_04700	0.67	-0.2
1,044,793	+		PS417_04700	0.67	-1.4
1,044,947	+		PS417_04700	0.80	+0.6