Strain Fitness in Pseudomonas simiae WCS417 around PS417_04120
Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.003 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 925,203 | - | +1.7 | |||
| 925,203 | - | +2.1 | |||
| 925,245 | - | +1.2 | |||
| 925,426 | - | PS417_04115 | 0.22 | -1.4 | |
| 925,426 | - | PS417_04115 | 0.22 | -0.9 | |
| 925,433 | + | PS417_04115 | 0.23 | -0.9 | |
| 925,474 | - | PS417_04115 | 0.29 | +0.2 | |
| 925,524 | + | PS417_04115 | 0.37 | -0.2 | |
| 925,801 | + | PS417_04115 | 0.81 | -1.9 | |
| 925,935 | + | -1.3 | |||
| 927,479 | + | +1.7 | |||
| 927,550 | + | PS417_04125 | 0.15 | -1.5 | |
| 927,890 | + | PS417_04125 | 0.46 | -1.9 |
Or see this region's nucleotide sequence