Strain Fitness in Pseudomonas simiae WCS417 around PS417_27920

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,019,078	+		PS417_27910	0.62	+0.2
6,019,151	+		PS417_27910	0.72	+0.7
6,019,215	-		PS417_27910	0.81	-1.1
6,019,215	-		PS417_27910	0.81	-0.9
6,019,340	+				-0.1
6,019,341	-				-0.9
6,019,355	+				-0.5
6,019,355	+				+0.2
6,019,356	-				-0.1
6,019,356	-				-0.7
6,019,356	-				+0.1
6,019,356	-				-0.6
6,019,440	+		PS417_27915	0.13	+0.9
6,019,441	-		PS417_27915	0.13	-0.5
6,019,507	-		PS417_27915	0.23	-0.1
6,019,693	+		PS417_27915	0.52	+1.2
6,019,694	-		PS417_27915	0.52	+0.2
6,019,853	+		PS417_27915	0.76	-0.7
6,019,854	-		PS417_27915	0.76	-0.3
6,019,989	-				-0.2
6,020,240	+				+0.4
6,020,241	-				+0.3
6,020,309	-				-0.5
6,020,533	+		PS417_27920	0.15	-0.8
6,020,546	-		PS417_27920	0.15	-0.5
6,020,557	+		PS417_27920	0.16	+0.7
6,020,557	+		PS417_27920	0.16	+1.0
6,020,557	+		PS417_27920	0.16	-1.6
6,020,558	-		PS417_27920	0.16	+1.6
6,020,558	-		PS417_27920	0.16	-0.0
6,020,729	+		PS417_27920	0.21	+0.2
6,020,729	+		PS417_27920	0.21	-1.0
6,020,730	-		PS417_27920	0.21	+0.1
6,020,730	-		PS417_27920	0.21	-0.3
6,020,890	+		PS417_27920	0.25	-0.8
6,020,890	+		PS417_27920	0.25	-0.8
6,020,890	+		PS417_27920	0.25	-0.9
6,020,890	+		PS417_27920	0.25	-0.3
6,021,284	-		PS417_27920	0.37	-0.0
6,021,562	+		PS417_27920	0.45	-0.9
6,021,767	-		PS417_27920	0.50	+0.0
6,021,767	-		PS417_27920	0.50	-0.1
6,021,812	-		PS417_27920	0.52	-0.7
6,022,096	+		PS417_27920	0.60	-0.3
6,022,096	+		PS417_27920	0.60	-0.5
6,022,096	+		PS417_27920	0.60	-1.1
6,022,097	-		PS417_27920	0.60	-0.2
6,022,097	-		PS417_27920	0.60	-1.7
6,022,097	-		PS417_27920	0.60	-2.9
6,022,114	+		PS417_27920	0.60	-0.2
6,022,273	+		PS417_27920	0.65	-0.7
6,022,274	-		PS417_27920	0.65	-0.1
6,022,391	-				+0.9
6,022,498	+		PS417_27920	0.71	+0.5
6,022,765	+		PS417_27920	0.79	-1.2
6,022,766	-		PS417_27920	0.79	-0.4
6,022,766	-		PS417_27920	0.79	+0.1
6,023,134	+		PS417_27920	0.89	+0.9
6,023,135	-		PS417_27920	0.89	-0.1
6,023,135	-		PS417_27920	0.89	+0.1
6,023,247	-				+0.1
6,023,799	+		PS417_27925	0.23	-1.3
6,023,906	-		PS417_27925	0.31	-0.1
6,024,295	-		PS417_27925	0.62	+0.9
6,024,295	-		PS417_27925	0.62	-1.1
6,024,313	-		PS417_27925	0.63	-0.6