Strain Fitness in Pseudomonas simiae WCS417 around PS417_27485

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,931,525	+		PS417_27480	0.59	+0.0
5,931,526	-		PS417_27480	0.59	-0.9
5,931,618	+		PS417_27480	0.64	+0.7
5,931,630	+				+1.7
5,931,630	+		PS417_27480	0.64	+0.9
5,931,630	+		PS417_27480	0.64	+0.3
5,931,726	+		PS417_27480	0.69	-0.6
5,931,895	+		PS417_27480	0.78	-0.3
5,931,942	+				+3.9
5,932,284	-				-0.5
5,932,289	+				-0.3
5,932,290	-				+0.2
5,932,290	-				+0.3
5,932,310	-				-1.8
5,932,326	-				+0.4
5,932,359	+				+0.1
5,932,359	+				-0.7
5,932,359	+				+1.5
5,932,359	+				+0.1
5,932,360	-				+0.1
5,932,360	-				+1.0
5,932,360	-				-0.0
5,932,396	+				+0.7
5,932,396	+				-0.2
5,932,396	+				-0.6
5,932,397	-				+0.3
5,932,571	+		PS417_27485	0.45	-0.4
5,932,572	-		PS417_27485	0.45	-1.1
5,932,581	-		PS417_27485	0.47	-0.4
5,932,581	-		PS417_27485	0.47	+0.1
5,932,826	-				+1.2
5,933,279	+		PS417_27490	0.69	-0.2
5,933,280	-		PS417_27490	0.70	+1.2
5,933,554	+				+1.8
5,933,555	-				+0.4
5,933,709	-		PS417_27495	0.56	+0.2
5,933,815	-				+1.4
5,933,815	-				+1.0