Strain Fitness in Pseudomonas simiae WCS417 around PS417_27210

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,874,423	-		PS417_27205	0.46	+0.1
5,874,423	-		PS417_27205	0.46	+0.8
5,875,037	+				-0.9
5,875,037	+				+0.2
5,875,127	+				+0.6
5,875,128	-				+0.1
5,875,219	+				-0.1
5,875,219	+				-2.0
5,875,220	-				+0.4
5,875,382	+		PS417_27210	0.24	+0.3
5,875,382	+		PS417_27210	0.24	-0.4
5,875,383	-		PS417_27210	0.24	+0.5
5,875,383	-		PS417_27210	0.24	-0.1
5,875,442	+		PS417_27210	0.37	+0.0
5,875,442	+		PS417_27210	0.37	-2.7
5,875,442	+				+0.1
5,875,442	+		PS417_27210	0.37	+1.7
5,875,443	-		PS417_27210	0.37	+3.7
5,875,443	-		PS417_27210	0.37	-0.1
5,875,742	+				+2.1
5,875,808	-				-0.3
5,875,889	+				+0.2
5,875,998	-		PS417_27215	0.38	-0.4
5,876,152	+		PS417_27215	0.84	+0.1
5,876,153	-		PS417_27215	0.84	-2.0
5,876,153	-		PS417_27215	0.84	-0.2
5,876,217	+				-0.2
5,876,217	+				+0.6
5,876,218	-				-0.6
5,876,218	-				-1.3
5,876,251	-				+0.1
5,876,262	+				+0.8
5,876,489	+		PS417_27220	0.12	-0.3
5,876,489	+		PS417_27220	0.12	+0.2
5,876,490	-		PS417_27220	0.12	-0.8
5,876,705	-		PS417_27220	0.25	+0.1