Strain Fitness in Pseudomonas simiae WCS417 around PS417_26895

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,807,183	+		PS417_26890	0.67	+1.1
5,807,578	-		PS417_26890	0.89	-1.6
5,807,717	+				-0.6
5,807,718	-				-0.0
5,807,784	-				+0.7
5,807,784	-				+0.7
5,807,784	-				+0.2
5,807,840	+				+3.3
5,807,841	-				-1.2
5,807,913	+				-0.4
5,807,913	+				-0.4
5,807,914	-				+2.1
5,808,078	+		PS417_26895	0.11	+0.5
5,808,078	+		PS417_26895	0.11	-1.0
5,808,079	-		PS417_26895	0.11	-0.5
5,808,079	-		PS417_26895	0.11	+0.2
5,808,079	-		PS417_26895	0.11	+1.7
5,808,079	-		PS417_26895	0.11	-0.2
5,808,079	-		PS417_26895	0.11	-0.5
5,808,147	+		PS417_26895	0.17	+0.0
5,808,176	+		PS417_26895	0.20	+0.1
5,808,176	+		PS417_26895	0.20	+1.2
5,808,176	+		PS417_26895	0.20	+0.5
5,808,176	+		PS417_26895	0.20	+0.5
5,808,177	-		PS417_26895	0.20	-1.1
5,808,177	-		PS417_26895	0.20	+1.3
5,808,207	+		PS417_26895	0.23	-0.3
5,808,207	+		PS417_26895	0.23	+1.1
5,808,207	+		PS417_26895	0.23	-0.1
5,808,208	-		PS417_26895	0.23	-0.5
5,808,208	-		PS417_26895	0.23	-0.5
5,808,262	-		PS417_26895	0.28	-1.3
5,808,262	-		PS417_26895	0.28	+0.6
5,808,402	+		PS417_26895	0.41	-1.8
5,808,461	+		PS417_26895	0.47	+0.8
5,808,461	+		PS417_26895	0.47	-0.2
5,808,461	+		PS417_26895	0.47	+0.3
5,808,461	+		PS417_26895	0.47	+0.2
5,808,461	+		PS417_26895	0.47	-0.9
5,808,462	-		PS417_26895	0.47	-0.1
5,808,462	-		PS417_26895	0.47	+0.6
5,808,462	-		PS417_26895	0.47	+0.5
5,808,462	-		PS417_26895	0.47	+1.3
5,808,465	+		PS417_26895	0.47	+0.3
5,808,465	+		PS417_26895	0.47	+0.8
5,808,465	+		PS417_26895	0.47	+0.9
5,808,465	+		PS417_26895	0.47	-0.6
5,808,465	+		PS417_26895	0.47	+0.4
5,808,466	-		PS417_26895	0.47	+0.5
5,808,466	-		PS417_26895	0.47	+0.2
5,808,466	-		PS417_26895	0.47	+1.4
5,808,466	-		PS417_26895	0.47	+0.5
5,808,706	-		PS417_26895	0.70	+0.2
5,808,706	-		PS417_26895	0.70	-0.2
5,808,708	+		PS417_26895	0.70	+0.9
5,808,754	+				+1.7
5,808,754	+		PS417_26895	0.75	-0.1
5,808,810	+		PS417_26895	0.80	+0.1
5,808,810	+		PS417_26895	0.80	+0.7
5,808,811	-		PS417_26895	0.80	+1.8
5,808,811	-		PS417_26895	0.80	-1.5
5,808,811	-		PS417_26895	0.80	-1.6
5,808,877	+		PS417_26895	0.86	-0.6
5,808,878	-		PS417_26895	0.86	+0.1
5,809,187	+				-0.1
5,809,288	+				+0.6
5,809,289	-				-0.3
5,809,289	-				+0.7
5,809,289	-				-1.1
5,809,289	-				-1.7
5,809,363	+				-1.8
5,809,363	+				+0.7
5,809,363	+				-0.1
5,809,364	-				+0.4
5,809,375	+				+1.0
5,809,476	+		PS417_26900	0.15	-1.6
5,809,477	-		PS417_26900	0.15	-0.3
5,809,514	-		PS417_26900	0.18	-0.5
5,810,005	+		PS417_26900	0.53	-0.3