Strain Fitness in Pseudomonas simiae WCS417 around PS417_26215

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,663,646	+		PS417_26205	0.64	+0.5
5,663,646	+		PS417_26205	0.64	-3.2
5,663,647	-		PS417_26205	0.64	+1.8
5,663,918	-		PS417_26205	0.90	-1.6
5,663,982	-				-1.3
5,664,080	-				-1.3
5,664,080	-				-0.3
5,664,083	+				-1.5
5,664,216	+				+1.1
5,664,372	+		PS417_26210	0.86	+0.7
5,664,484	+				+0.3
5,664,644	+				+0.6
5,664,645	-				-0.1
5,664,647	-				-1.3
5,665,192	+		PS417_26215	0.54	-0.6
5,665,192	+		PS417_26215	0.54	+0.5
5,665,193	-		PS417_26215	0.54	-2.0
5,665,312	+		PS417_26215	0.65	+2.3
5,665,313	-		PS417_26215	0.65	-1.7
5,665,459	+		PS417_26215	0.79	-0.9
5,665,460	-		PS417_26215	0.79	+0.0
5,665,760	+				+0.0
5,665,760	+				+0.7
5,665,760	+				-1.8
5,665,764	+				+2.0
5,665,765	-				+0.1
5,665,781	+				+0.7
5,665,781	+				+0.8
5,665,781	+				-0.1
5,665,781	+				+0.2
5,665,782	-				-0.6
5,665,809	+				-0.8
5,665,810	-				-0.8
5,665,810	-				-1.1
5,665,938	-				+1.3
5,665,997	-				-1.5
5,666,088	+				+4.7
5,666,089	-				-0.3
5,666,349	+		PS417_26220	0.29	-0.4
5,666,350	-		PS417_26220	0.29	+0.1
5,666,521	-		PS417_26220	0.42	-0.7
5,666,562	-				+3.3
5,666,622	+		PS417_26220	0.50	-0.5