Strain Fitness in Pseudomonas simiae WCS417 around PS417_25965

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,608,310	-		PS417_25960	0.53	-0.4
5,608,405	-		PS417_25960	0.58	-0.1
5,608,551	+		PS417_25960	0.67	-0.8
5,608,577	+		PS417_25960	0.68	+0.3
5,608,680	-		PS417_25960	0.74	+1.8
5,608,764	-		PS417_25960	0.79	+0.1
5,608,887	-		PS417_25960	0.85	-1.0
5,608,887	-		PS417_25960	0.85	+0.6
5,609,027	-				-1.3
5,609,115	+				-1.4
5,609,135	+				+0.9
5,609,136	-				+0.1
5,609,193	+				-0.4
5,609,346	+				-1.8
5,609,347	-				+1.4
5,609,370	-				-1.0
5,609,370	-				+0.1
5,609,453	+		PS417_25965	0.10	-0.8
5,609,454	-		PS417_25965	0.10	-0.5
5,609,454	-		PS417_25965	0.10	+0.7
5,609,468	+		PS417_25965	0.11	+1.4
5,609,477	+		PS417_25965	0.12	-2.1
5,609,478	-		PS417_25965	0.12	-0.4
5,609,478	-		PS417_25965	0.12	+0.7
5,609,486	+		PS417_25965	0.12	-0.6
5,609,486	+		PS417_25965	0.12	+0.2
5,609,487	-		PS417_25965	0.12	-0.3
5,609,594	+		PS417_25965	0.18	-0.9
5,609,594	+		PS417_25965	0.18	-0.7
5,609,594	+		PS417_25965	0.18	-0.1
5,609,595	-		PS417_25965	0.18	-0.8
5,609,595	-		PS417_25965	0.18	-2.6
5,609,595	-		PS417_25965	0.18	+0.7
5,609,684	-		PS417_25965	0.23	-0.7
5,609,684	-		PS417_25965	0.23	-1.1
5,609,684	-		PS417_25965	0.23	-0.6
5,609,735	+		PS417_25965	0.26	+0.7
5,609,735	+		PS417_25965	0.26	-0.5
5,609,735	+		PS417_25965	0.26	+0.2
5,609,735	+		PS417_25965	0.26	-0.9
5,609,736	-		PS417_25965	0.26	-1.1
5,609,736	-		PS417_25965	0.26	+0.2
5,609,736	-		PS417_25965	0.26	-1.3
5,609,736	-		PS417_25965	0.26	+0.3
5,609,793	-		PS417_25965	0.30	+1.1
5,609,793	-		PS417_25965	0.30	+0.4
5,609,793	-		PS417_25965	0.30	-0.7
5,609,960	+		PS417_25965	0.39	-1.2
5,609,961	-		PS417_25965	0.39	+0.4
5,610,104	+		PS417_25965	0.47	+0.3
5,610,363	+		PS417_25965	0.62	-1.5
5,610,364	-		PS417_25965	0.62	+1.3
5,610,403	+		PS417_25965	0.64	+0.2
5,610,404	-		PS417_25965	0.64	+1.5
5,610,477	-		PS417_25965	0.68	-1.5
5,610,662	+		PS417_25965	0.79	+0.5
5,610,663	-		PS417_25965	0.79	-1.1
5,610,663	-		PS417_25965	0.79	+0.3
5,610,663	-		PS417_25965	0.79	-0.5
5,610,663	-		PS417_25965	0.79	-1.1
5,610,743	+		PS417_25965	0.83	+0.4
5,610,744	-		PS417_25965	0.83	-1.3
5,610,785	+		PS417_25965	0.86	-2.2
5,610,820	-		PS417_25965	0.88	-0.9
5,610,820	-		PS417_25965	0.88	-0.6
5,611,102	+				+1.5
5,611,103	-				-0.8
5,611,218	-				+0.9
5,611,239	+				+0.2
5,611,392	-		PS417_25970	0.20	-1.0
5,611,619	+		PS417_25970	0.38	+0.1
5,611,619	+		PS417_25970	0.38	+0.7
5,611,619	+		PS417_25970	0.38	-0.7
5,611,619	+		PS417_25970	0.38	+0.2
5,611,619	+		PS417_25970	0.38	+0.7
5,611,619	+		PS417_25970	0.38	-0.9
5,611,620	-		PS417_25970	0.38	+0.1
5,611,620	-		PS417_25970	0.38	-0.4
5,611,620	-		PS417_25970	0.38	+0.3