Strain Fitness in Pseudomonas simiae WCS417 around PS417_25625

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,535,518	-				-2.1
5,535,551	-				-1.5
5,535,551	-				-0.0
5,535,593	-				+2.3
5,535,593	-				+0.1
5,535,601	-				-1.6
5,535,615	-				+0.5
5,536,037	-				-0.9
5,536,037	-				-1.3
5,536,037	-				-2.8
5,536,037	-				-0.3
5,536,037	-				-0.1
5,536,078	-				+0.0
5,536,190	+		PS417_25625	0.33	-0.3
5,536,191	-		PS417_25625	0.33	-2.0
5,536,215	+		PS417_25625	0.38	-1.9
5,536,215	+		PS417_25625	0.38	-2.8
5,536,216	-		PS417_25625	0.38	-1.0
5,536,216	-		PS417_25625	0.38	-1.0
5,536,216	-		PS417_25625	0.38	-1.1
5,536,217	+		PS417_25625	0.39	-0.8
5,536,218	-		PS417_25625	0.39	-0.7
5,536,282	+		PS417_25625	0.53	+0.8
5,536,282	+		PS417_25625	0.53	+1.3
5,536,283	-		PS417_25625	0.53	-2.6
5,536,283	-		PS417_25625	0.53	-0.6
5,536,283	-		PS417_25625	0.53	-1.1
5,536,292	+		PS417_25625	0.55	-1.5
5,536,384	+		PS417_25625	0.76	-0.4
5,536,385	-		PS417_25625	0.76	-1.0
5,536,385	-		PS417_25625	0.76	-0.6
5,536,385	-		PS417_25625	0.76	-0.2
5,536,444	+		PS417_25625	0.89	+0.8
5,536,445	-		PS417_25625	0.90	-0.5
5,536,445	-		PS417_25625	0.90	+0.9
5,536,447	+				-0.0
5,536,447	+				+0.2
5,536,447	+				-0.4
5,536,448	-				-0.1
5,536,448	-				-1.0
5,536,490	+				-0.6
5,536,491	-				-0.4