Strain Fitness in Pseudomonas simiae WCS417 around PS417_24860

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,390,910	-		PS417_24855	0.31	+1.0
5,390,937	+		PS417_24855	0.33	+0.6
5,390,937	+		PS417_24855	0.33	+0.4
5,390,937	+		PS417_24855	0.33	-1.4
5,390,937	+		PS417_24855	0.33	+0.4
5,390,938	-		PS417_24855	0.33	+0.9
5,390,953	+		PS417_24855	0.34	-2.1
5,390,954	-		PS417_24855	0.34	-0.5
5,390,982	-		PS417_24855	0.37	+1.9
5,391,012	-		PS417_24855	0.39	-0.3
5,391,021	-		PS417_24855	0.40	-0.5
5,391,046	+		PS417_24855	0.42	-0.4
5,391,046	+		PS417_24855	0.42	+0.8
5,391,046	+		PS417_24855	0.42	+0.7
5,391,047	-		PS417_24855	0.42	-0.3
5,391,047	-		PS417_24855	0.42	-0.8
5,391,047	-		PS417_24855	0.42	-1.0
5,391,080	+		PS417_24855	0.45	-1.3
5,391,094	+		PS417_24855	0.46	-0.7
5,391,094	+		PS417_24855	0.46	-1.0
5,391,095	-		PS417_24855	0.46	-1.8
5,391,134	-		PS417_24855	0.49	-0.6
5,391,299	+		PS417_24855	0.63	-2.5
5,391,299	+		PS417_24855	0.63	+0.8
5,391,335	-		PS417_24855	0.66	-0.4
5,391,461	-		PS417_24855	0.76	-0.2
5,391,526	+		PS417_24855	0.81	-1.7
5,391,526	+		PS417_24855	0.81	-0.9
5,391,527	-		PS417_24855	0.81	-1.5
5,391,527	-		PS417_24855	0.81	-0.2
5,391,527	-		PS417_24855	0.81	-0.7
5,391,542	+		PS417_24855	0.83	+2.0
5,391,590	+		PS417_24855	0.87	+0.7
5,391,591	-		PS417_24855	0.87	+1.0
5,391,591	-				-0.3
5,391,591	-		PS417_24855	0.87	+0.6
5,391,610	+		PS417_24855	0.88	-0.1
5,391,610	+		PS417_24855	0.88	+3.4
5,391,610	+		PS417_24855	0.88	+0.3
5,391,611	-		PS417_24855	0.88	+0.7
5,391,726	-				-0.7
5,391,733	+				+1.6
5,391,928	+				-1.7
5,391,953	+		PS417_24860	0.12	+0.6
5,391,959	+		PS417_24860	0.13	+0.2
5,392,019	+		PS417_24860	0.22	+1.5
5,392,106	-		PS417_24860	0.34	+0.8
5,392,136	-		PS417_24860	0.38	+1.2
5,392,228	-		PS417_24860	0.51	-1.3
5,392,415	-		PS417_24860	0.77	+0.7
5,392,418	+		PS417_24860	0.77	-0.1
5,392,419	-		PS417_24860	0.77	+1.0
5,392,608	-				+0.1
5,392,625	+				+3.5
5,392,625	+				-0.0
5,392,626	-				+1.0
5,392,645	+				-1.9
5,392,671	+				-0.5
5,392,699	-				-1.8
5,392,762	+				-0.5
5,392,781	+		PS417_24865	0.10	-0.2
5,392,781	+		PS417_24865	0.10	+0.1
5,392,782	-		PS417_24865	0.10	+0.1
5,392,802	+		PS417_24865	0.12	+0.1
5,392,802	+		PS417_24865	0.12	-0.0
5,392,802	+		PS417_24865	0.12	+0.1
5,392,803	-		PS417_24865	0.12	-0.4
5,392,803	-		PS417_24865	0.12	-0.9
5,392,827	+		PS417_24865	0.15	-0.7
5,392,828	-		PS417_24865	0.15	-0.9
5,392,828	-		PS417_24865	0.15	-1.1
5,392,846	-		PS417_24865	0.16	-0.6
5,392,877	+		PS417_24865	0.19	-1.5
5,392,877	+		PS417_24865	0.19	-0.9
5,392,878	-		PS417_24865	0.20	-0.3
5,392,907	+		PS417_24865	0.22	-0.5
5,392,907	+		PS417_24865	0.22	-0.1
5,392,910	-		PS417_24865	0.23	+1.3
5,392,930	+		PS417_24865	0.25	-0.7
5,392,930	+		PS417_24865	0.25	-0.3
5,392,931	-		PS417_24865	0.25	+1.1
5,392,943	+				-1.5
5,392,997	+		PS417_24865	0.31	-0.0
5,392,997	+		PS417_24865	0.31	+2.4
5,392,998	-		PS417_24865	0.31	-0.0
5,393,016	-				+2.4
5,393,125	-		PS417_24865	0.43	-0.8
5,393,205	+		PS417_24865	0.51	-0.2
5,393,397	-		PS417_24865	0.70	+1.1
5,393,442	-		PS417_24865	0.74	-0.0