Strain Fitness in Pseudomonas simiae WCS417 around PS417_24525

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,320,765	-				+0.2
5,320,821	+				-0.9
5,320,822	-				-0.7
5,320,825	+				+1.0
5,320,826	-				-0.4
5,320,826	-				+0.3
5,320,869	+				-0.1
5,320,869	+				+1.4
5,320,870	-				-0.7
5,320,871	+				-0.1
5,320,871	+				-2.3
5,320,871	+				+0.5
5,320,872	-				-1.0
5,320,872	-				+0.0
5,321,151	+		PS417_24520	0.33	-2.0
5,321,151	+		PS417_24520	0.33	-0.5
5,321,265	+		PS417_24520	0.51	+0.7
5,321,265	+		PS417_24520	0.51	+2.3
5,321,265	+		PS417_24520	0.51	+0.2
5,321,266	-		PS417_24520	0.51	+0.2
5,321,554	+				+0.8
5,321,554	+				-2.3
5,321,554	+				-0.6
5,321,555	-				-0.9
5,321,555	-				-0.7
5,321,555	-				+0.3
5,321,555	-				-1.5
5,321,590	+				-0.2
5,321,595	-				+0.7
5,321,674	+		PS417_24525	0.18	-1.3
5,321,845	+		PS417_24525	0.54	-1.3
5,321,846	-		PS417_24525	0.54	-1.5
5,321,929	+		PS417_24525	0.71	-1.9
5,321,936	-		PS417_24525	0.73	-1.3
5,322,022	+				-1.7
5,322,022	+				-0.4
5,322,023	-				-1.0
5,322,026	-				-1.5
5,322,496	+		PS417_24530	0.43	-0.5
5,322,497	-		PS417_24530	0.43	+1.4
5,322,497	-		PS417_24530	0.43	-0.7
5,322,717	-		PS417_24530	0.73	-0.7
5,322,775	+		PS417_24530	0.81	-0.6
5,322,775	+		PS417_24530	0.81	-1.7
5,322,775	+		PS417_24530	0.81	+1.0
5,322,776	-		PS417_24530	0.81	+3.5
5,322,776	-		PS417_24530	0.81	+1.1
5,322,776	-		PS417_24530	0.81	-0.9
5,322,974	+				+0.8
5,322,974	+				-0.8
5,322,975	-				+0.3
5,322,975	-				+0.7
5,323,022	+				-0.1
5,323,023	-				+0.1
5,323,023	-				+0.2
5,323,032	+				+0.8
5,323,033	-				-0.8