Strain Fitness in Pseudomonas simiae WCS417 around PS417_22345

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,839,737	+				-1.8
4,839,738	-				+0.1
4,839,818	+				+0.5
4,839,927	+		PS417_22340	0.20	-1.1
4,839,991	-		PS417_22340	0.27	+0.6
4,840,120	-		PS417_22340	0.41	-0.3
4,840,189	-		PS417_22340	0.48	+0.1
4,840,308	+		PS417_22340	0.61	+1.7
4,840,308	+		PS417_22340	0.61	-0.4
4,840,309	-		PS417_22340	0.61	+0.2
4,840,434	-		PS417_22340	0.75	+0.9
4,840,659	+				-0.3
4,840,660	-				+0.0
4,840,660	-				+1.4
4,840,670	+				+0.5
4,840,671	-				+1.2
4,840,685	+				-1.3
4,840,686	-				+1.5
4,840,747	-		PS417_22345	0.17	+1.0
4,840,752	+		PS417_22345	0.18	-1.1
4,840,752	+		PS417_22345	0.18	+0.7
4,840,752	+		PS417_22345	0.18	+1.3
4,840,753	-		PS417_22345	0.18	+0.1
4,840,753	-		PS417_22345	0.18	-2.1
4,840,753	-		PS417_22345	0.18	+0.3
4,841,008	+		PS417_22345	0.89	+0.9
4,841,008	+		PS417_22345	0.89	+0.7
4,841,047	-				+1.4
4,841,111	+				+2.1
4,841,111	+				+1.0
4,841,112	-				+0.3
4,841,113	+				-0.8
4,841,114	-				-0.2
4,841,114	-				+0.1
4,841,183	-				-0.4
4,841,183	-				-0.5
4,841,337	-				+0.9
4,841,337	-				-0.5
4,841,556	-		PS417_22350	0.22	-2.4