Strain Fitness in Pseudomonas simiae WCS417 around PS417_21965

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,762,424	-				-0.1
4,762,451	-				-0.1
4,762,451	-				-0.9
4,762,451	-				-2.7
4,762,573	+		PS417_21955	0.32	-0.3
4,762,573	+		PS417_21955	0.32	+0.9
4,762,723	+		PS417_21955	0.75	-0.2
4,762,801	+				-2.2
4,762,801	+				-0.2
4,762,838	+				+1.3
4,762,838	+				+0.0
4,762,839	-				+0.9
4,762,839	-				-2.6
4,763,395	+				-0.6
4,763,395	+				+0.7
4,763,396	-				-0.2
4,763,396	-				+0.2
4,763,823	-		PS417_21965	0.78	-0.2
4,763,858	+		PS417_21965	0.85	+2.8
4,763,858	+		PS417_21965	0.85	-1.4
4,763,858	+		PS417_21965	0.85	-0.3
4,763,859	-		PS417_21965	0.85	-0.6
4,763,859	-		PS417_21965	0.85	-1.9
4,763,859	-		PS417_21965	0.85	-0.9
4,763,859	-		PS417_21965	0.85	-1.4
4,763,859	-		PS417_21965	0.85	-0.4
4,763,859	-		PS417_21965	0.85	-1.9
4,763,859	-		PS417_21965	0.85	+0.1
4,763,860	+		PS417_21965	0.85	+0.0
4,763,861	-		PS417_21965	0.86	+0.2
4,763,861	-		PS417_21965	0.86	+0.8
4,763,861	-		PS417_21965	0.86	-0.2
4,763,861	-		PS417_21965	0.86	-0.0
4,763,861	-		PS417_21965	0.86	-0.0
4,763,934	-				+0.2
4,763,934	-				+1.0
4,763,938	+				-0.6
4,763,944	+				-0.5
4,763,975	-				+1.1
4,764,012	+				-0.0
4,764,427	+		PS417_21970	0.39	+0.1
4,764,428	-		PS417_21970	0.40	-2.7
4,764,737	+				-1.1
4,764,737	+				-1.5
4,764,738	-				+0.5
4,764,738	-				-0.2
4,764,762	+				-0.6
4,764,764	+				-1.9
4,764,765	-				-0.6
4,764,837	+				-0.6
4,764,837	+				-0.0
4,764,897	-				+0.7
4,764,897	-				+0.1
4,764,897	-				-0.9