Strain Fitness in Pseudomonas simiae WCS417 around PS417_19095

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,127,941	+				-0.0
4,128,056	+				-0.5
4,128,168	-				+0.4
4,128,258	+				-0.8
4,128,368	+				-1.7
4,128,368	+				+0.0
4,128,509	+				-0.3
4,128,514	-		PS417_19085	0.18	+1.8
4,128,516	-		PS417_19085	0.19	+0.2
4,128,568	+		PS417_19085	0.41	-0.7
4,128,569	-		PS417_19085	0.41	-0.7
4,128,617	-		PS417_19085	0.62	-0.6
4,128,650	-		PS417_19085	0.76	-0.1
4,128,694	-				-0.1
4,128,698	-				+0.4
4,128,737	-		PS417_19090	0.24	-0.2
4,128,756	+		PS417_19090	0.34	-1.3
4,128,757	-		PS417_19090	0.34	+0.1
4,128,795	-		PS417_19090	0.54	-0.1
4,128,920	+		PS417_19095	0.14	-2.0
4,128,926	-		PS417_19095	0.16	-2.0
4,129,036	-				-0.9
4,129,040	-		PS417_19095	0.56	-0.7
4,129,151	-				-0.5
4,129,507	+		PS417_19105	0.14	-0.6
4,129,508	-		PS417_19105	0.14	+0.2
4,129,528	+		PS417_19105	0.23	-0.1
4,129,528	+		PS417_19105	0.23	-0.4
4,129,529	-		PS417_19105	0.24	-0.7
4,129,529	-		PS417_19105	0.24	-0.0
4,129,529	-		PS417_19105	0.24	-0.3
4,129,529	-		PS417_19105	0.24	-1.1
4,129,532	+		PS417_19105	0.25	+0.4
4,129,532	+		PS417_19105	0.25	-0.2
4,129,532	+		PS417_19105	0.25	+0.8
4,129,532	+		PS417_19105	0.25	+1.9
4,129,532	+		PS417_19105	0.25	-0.2
4,129,532	+		PS417_19105	0.25	+0.4
4,129,533	-		PS417_19105	0.26	-0.2
4,129,533	-		PS417_19105	0.26	-0.5
4,129,533	-		PS417_19105	0.26	+0.2
4,129,533	-		PS417_19105	0.26	+1.1
4,129,533	-		PS417_19105	0.26	+1.8
4,129,534	+				+1.7
4,129,535	-		PS417_19105	0.27	-0.2
4,129,548	+		PS417_19105	0.32	-1.3
4,129,578	-		PS417_19105	0.46	+0.8
4,129,644	+				+0.9
4,129,645	-		PS417_19105	0.76	+0.2
4,129,646	+		PS417_19105	0.77	-0.4
4,129,672	+				-0.9
4,129,672	+		PS417_19105	0.88	-0.1
4,129,672	+		PS417_19105	0.88	-1.4
4,129,673	-		PS417_19105	0.89	-0.0
4,129,673	-		PS417_19105	0.89	+1.4
4,129,695	+				-0.5
4,129,695	+				-1.0
4,129,832	-		PS417_19110	0.17	+0.9
4,129,832	-		PS417_19110	0.17	-1.6
4,129,848	+		PS417_19110	0.23	+3.1
4,129,848	+		PS417_19110	0.23	+1.1
4,129,849	-		PS417_19110	0.23	+0.7
4,129,852	+		PS417_19110	0.24	-0.5
4,129,852	+		PS417_19110	0.24	-0.4
4,129,925	+		PS417_19110	0.48	-1.3
4,129,926	-		PS417_19110	0.49	+0.7
4,129,926	-		PS417_19110	0.49	+0.5
4,129,959	+		PS417_19110	0.60	-0.4
4,129,959	+		PS417_19110	0.60	+0.7
4,130,001	+		PS417_19110	0.74	-0.3
4,130,001	+		PS417_19110	0.74	+0.4
4,130,014	+		PS417_19110	0.78	+1.2
4,130,157	+				-0.2
4,130,158	-				+1.7
4,130,158	-				-0.5
4,130,158	-				-0.1
4,130,158	-				+0.7
4,130,161	+				+0.1
4,130,161	+				+0.7
4,130,162	-				-1.9
4,130,162	-				+0.9