Strain Fitness in Pseudomonas simiae WCS417 around PS417_18895

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,090,791	+		PS417_18890	0.30	+0.2
4,090,794	+		PS417_18890	0.30	+1.0
4,091,163	+		PS417_18890	0.57	+0.9
4,091,187	+		PS417_18890	0.59	+0.2
4,091,196	-		PS417_18890	0.60	-0.5
4,091,298	+		PS417_18890	0.67	+0.7
4,091,298	+		PS417_18890	0.67	-1.0
4,091,390	+		PS417_18890	0.74	-0.1
4,091,745	+				-1.4
4,091,766	+				+0.2
4,091,766	+				+0.7
4,091,766	+				+0.1
4,091,767	-				-0.5
4,091,767	-				+0.8
4,091,767	-				+0.3
4,091,779	-				+0.1
4,091,987	-		PS417_18895	0.17	-1.0
4,092,206	-		PS417_18895	0.34	-0.3
4,092,206	-		PS417_18895	0.34	-0.7
4,092,206	-		PS417_18895	0.34	-0.2
4,092,206	-		PS417_18895	0.34	-0.4
4,092,343	+		PS417_18895	0.44	-1.7
4,092,343	+		PS417_18895	0.44	-1.2
4,092,512	+		PS417_18895	0.57	+0.9
4,092,513	-		PS417_18895	0.57	-0.1
4,092,783	+		PS417_18895	0.77	-0.7
4,092,985	+				-0.5
4,093,269	+				+1.2
4,093,270	-				+0.8
4,093,270	-				-1.2
4,093,307	-				-0.2
4,093,309	+				+3.9
4,093,309	+				+0.4
4,093,309	+				-0.6
4,093,310	-				+1.5
4,093,310	-				+0.6
4,093,310	-				+0.5
4,093,310	-				+0.1
4,093,310	-				-0.0
4,093,310	-				-0.3
4,093,530	-		PS417_18900	0.21	-1.0
4,093,637	+		PS417_18900	0.33	+0.9
4,093,709	+		PS417_18900	0.41	-0.5
4,093,710	-		PS417_18900	0.41	+2.0
4,093,781	+		PS417_18900	0.48	-0.3
4,093,832	+		PS417_18900	0.54	-2.5
4,093,832	+		PS417_18900	0.54	+0.6
4,093,832	+		PS417_18900	0.54	+0.6
4,093,832	+		PS417_18900	0.54	+0.5
4,093,833	-		PS417_18900	0.54	-0.3
4,093,960	+		PS417_18900	0.68	+0.4