Strain Fitness in Pseudomonas simiae WCS417 around PS417_17745

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,872,278	+				+0.0
3,872,367	+				+0.1
3,872,368	-				+0.5
3,872,368	-				-1.0
3,872,368	-				-0.3
3,872,414	-				-0.2
3,872,414	-				+0.7
3,872,591	-		PS417_17740	0.20	+0.6
3,872,591	-		PS417_17740	0.20	-1.6
3,872,591	-		PS417_17740	0.20	-1.1
3,872,591	-		PS417_17740	0.20	+0.3
3,872,593	-		PS417_17740	0.21	+0.2
3,872,593	-		PS417_17740	0.21	-0.7
3,872,705	+		PS417_17740	0.37	-0.1
3,873,071	+				-0.8
3,873,072	-				+0.4
3,873,550	-		PS417_17745	0.38	+0.6
3,873,613	+		PS417_17745	0.44	+0.5
3,873,619	+		PS417_17745	0.45	+0.9
3,873,620	-		PS417_17745	0.45	+1.0
3,874,117	+		PS417_17745	0.90	+0.7
3,874,144	+				-2.2
3,874,225	+				-0.5
3,874,260	+				-0.4
3,874,260	+				+0.2
3,874,260	+				+0.8
3,874,261	-				+0.8
3,874,261	-				+0.7
3,874,264	+				+1.5
3,874,264	+				-0.6
3,874,264	+				-1.0
3,874,265	-				-0.9
3,874,320	-				+0.4
3,874,371	+				+0.4
3,874,410	-				-0.2
3,874,633	-		PS417_17750	0.25	-0.8
3,874,672	+		PS417_17750	0.27	+0.5
3,874,923	-		PS417_17750	0.45	-0.5
3,875,058	-		PS417_17750	0.54	-0.5
3,875,129	+		PS417_17750	0.59	-0.3
3,875,129	+		PS417_17750	0.59	+0.6
3,875,130	-		PS417_17750	0.59	+0.4
3,875,136	-		PS417_17750	0.60	+0.1
3,875,139	-		PS417_17750	0.60	+0.1