Strain Fitness in Pseudomonas simiae WCS417 around PS417_17175

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,750,080	+		PS417_17170	0.30	-0.8
3,750,081	-		PS417_17170	0.30	+0.2
3,750,192	-		PS417_17170	0.40	-0.1
3,750,192	-		PS417_17170	0.40	+0.3
3,750,227	+		PS417_17170	0.43	+0.0
3,750,347	+		PS417_17170	0.54	+0.5
3,750,347	+		PS417_17170	0.54	-2.5
3,750,347	+		PS417_17170	0.54	-0.6
3,750,347	+		PS417_17170	0.54	-0.0
3,750,347	+		PS417_17170	0.54	-0.2
3,750,347	+		PS417_17170	0.54	-0.2
3,750,348	-		PS417_17170	0.54	-0.9
3,750,348	-		PS417_17170	0.54	+0.1
3,750,348	-				-0.7
3,750,350	-		PS417_17170	0.54	+0.1
3,750,419	+		PS417_17170	0.60	+0.2
3,750,420	-		PS417_17170	0.60	+1.1
3,750,436	+		PS417_17170	0.61	-0.3
3,750,498	+		PS417_17170	0.67	-0.2
3,750,498	+		PS417_17170	0.67	-0.6
3,750,499	-		PS417_17170	0.67	-1.0
3,750,700	+		PS417_17170	0.85	-0.4
3,750,701	-		PS417_17170	0.85	-3.8
3,750,859	+				-0.7
3,751,285	+		PS417_17175	0.41	-0.4
3,751,286	-		PS417_17175	0.41	+1.3
3,751,399	+				-0.4
3,751,526	+		PS417_17175	0.64	-0.0
3,751,527	-		PS417_17175	0.64	-2.8
3,751,527	-		PS417_17175	0.64	+1.6
3,751,753	+		PS417_17175	0.86	+0.3
3,751,753	+		PS417_17175	0.86	+0.4
3,751,792	+		PS417_17175	0.90	+5.0
3,751,792	+		PS417_17175	0.90	-1.8
3,751,792	+		PS417_17175	0.90	+0.9
3,751,907	-				-1.3
3,752,027	+				-0.8
3,752,028	-				+0.0
3,752,028	-				+0.8
3,752,107	-				+0.5
3,752,113	-				+0.2
3,752,124	-				-0.5
3,752,145	-				-0.8
3,752,199	+				+0.3
3,752,200	-				+0.3
3,752,200	-				+0.3
3,752,200	-				+1.2
3,752,311	+				+0.4
3,752,311	+				+0.3
3,752,425	-		PS417_17185	0.19	-0.2
3,752,447	-		PS417_17185	0.21	-0.2
3,752,605	-		PS417_17185	0.37	-0.0
3,752,611	+		PS417_17185	0.37	-1.0
3,752,612	-		PS417_17185	0.38	+0.2
3,752,671	+		PS417_17185	0.43	-1.0
3,752,695	+		PS417_17185	0.46	+0.7
3,752,695	+		PS417_17185	0.46	-0.4
3,752,695	+		PS417_17185	0.46	-0.4
3,752,695	+		PS417_17185	0.46	+0.1
3,752,698	+		PS417_17185	0.46	+0.1
3,752,773	+				+0.2
3,752,774	-		PS417_17185	0.53	+0.1
3,752,774	-		PS417_17185	0.53	+0.0