Strain Fitness in Pseudomonas simiae WCS417 around PS417_16940

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,693,694	+		PS417_16935	0.20	+0.1
3,694,005	+		PS417_16935	0.47	+2.2
3,694,353	-		PS417_16935	0.76	-0.2
3,694,353	-		PS417_16935	0.76	+1.7
3,694,353	-		PS417_16935	0.76	-1.5
3,694,723	+				-0.2
3,694,776	+				-0.5
3,694,800	-				-0.8
3,694,928	-				-0.5
3,694,997	+				-0.8
3,694,997	+				-1.1
3,694,997	+				-0.5
3,694,998	-				-0.6
3,694,998	-				+0.2
3,695,099	+		PS417_16940	0.13	+0.8
3,695,100	-		PS417_16940	0.13	-1.0
3,695,112	-		PS417_16940	0.13	-0.2
3,695,114	+		PS417_16940	0.13	-0.0
3,695,115	-				-1.8
3,695,115	-		PS417_16940	0.13	+0.3
3,695,330	+		PS417_16940	0.20	+0.1
3,695,375	+				-1.5
3,695,376	-		PS417_16940	0.22	+0.6
3,695,651	+		PS417_16940	0.30	+1.1
3,695,651	+		PS417_16940	0.30	-0.4
3,695,681	+		PS417_16940	0.31	-0.1
3,695,697	+		PS417_16940	0.32	+1.6
3,695,697	+		PS417_16940	0.32	+0.3
3,695,940	-		PS417_16940	0.40	-0.1
3,696,257	+		PS417_16940	0.50	+0.8
3,696,258	-		PS417_16940	0.50	-0.3
3,696,440	+		PS417_16940	0.55	-0.4
3,696,441	-		PS417_16940	0.55	+2.1
3,696,879	-		PS417_16940	0.69	+0.5
3,696,954	+		PS417_16940	0.72	-0.6
3,697,351	+		PS417_16940	0.84	+1.1
3,697,352	-		PS417_16940	0.84	+0.4
3,697,462	+		PS417_16940	0.88	+0.3
3,697,463	-		PS417_16940	0.88	-0.1
3,697,888	+				+1.4
3,697,888	+				-2.3
3,698,045	+		PS417_16945	0.27	+1.2
3,698,116	+		PS417_16945	0.38	+0.6
3,698,116	+		PS417_16945	0.38	+0.0
3,698,267	+		PS417_16945	0.61	+0.5
3,698,363	+		PS417_16945	0.76	+1.6
3,698,488	-				-1.6
3,698,514	+				+0.3
3,698,794	+		PS417_16950	0.33	-0.9
3,698,809	+		PS417_16950	0.35	-1.2
3,698,810	-		PS417_16950	0.35	-1.7
3,698,810	-		PS417_16950	0.35	-0.0