Strain Fitness in Pseudomonas simiae WCS417 around PS417_16935

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,692,555	-		PS417_16930	0.67	-0.6
3,692,758	+				-1.5
3,692,759	-		PS417_16930	0.75	-0.3
3,692,759	-				+0.8
3,692,873	+		PS417_16930	0.79	-0.0
3,692,874	-		PS417_16930	0.79	+0.6
3,693,258	+				-0.6
3,693,306	+				-0.4
3,693,307	-				+0.2
3,693,307	-				+0.2
3,693,504	-				-1.4
3,693,504	-				+0.3
3,693,649	+		PS417_16935	0.17	-0.6
3,693,694	+		PS417_16935	0.20	+0.1
3,694,005	+		PS417_16935	0.47	+2.2
3,694,353	-		PS417_16935	0.76	-0.2
3,694,353	-		PS417_16935	0.76	+1.7
3,694,353	-		PS417_16935	0.76	-1.5
3,694,723	+				-0.2
3,694,776	+				-0.5
3,694,800	-				-0.8
3,694,928	-				-0.5
3,694,997	+				-0.8
3,694,997	+				-1.1
3,694,997	+				-0.5
3,694,998	-				-0.6
3,694,998	-				+0.2
3,695,099	+		PS417_16940	0.13	+0.8
3,695,100	-		PS417_16940	0.13	-1.0
3,695,112	-		PS417_16940	0.13	-0.2
3,695,114	+		PS417_16940	0.13	-0.0
3,695,115	-				-1.8
3,695,115	-		PS417_16940	0.13	+0.3
3,695,330	+		PS417_16940	0.20	+0.1
3,695,375	+				-1.5
3,695,376	-		PS417_16940	0.22	+0.6