Strain Fitness in Pseudomonas simiae WCS417 around PS417_13980

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,070,467	+		PS417_13975	0.32	-0.1
3,070,687	+		PS417_13975	0.51	+0.4
3,070,687	+		PS417_13975	0.51	-0.2
3,070,731	+		PS417_13975	0.55	-0.5
3,070,731	+		PS417_13975	0.55	-0.3
3,071,161	-				-0.2
3,071,191	+				+1.8
3,071,192	-				-0.5
3,071,366	+				+0.5
3,071,366	+				-0.1
3,071,367	-				-0.3
3,071,369	+				+0.0
3,071,370	-				-0.2
3,071,438	+				-0.5
3,071,438	+				-0.4
3,071,438	+				-0.6
3,071,439	-				+0.3
3,071,484	-				-1.5
3,071,484	-				-1.0
3,071,484	-				-1.2
3,071,495	+				+0.7
3,071,495	+				-0.8
3,071,496	-				-0.6
3,071,496	-				-0.8
3,071,496	-				-0.0
3,071,496	-				+0.4
3,071,508	+				+0.8
3,071,607	+		PS417_13980	0.17	-0.6
3,071,607	+		PS417_13980	0.17	-0.4
3,071,793	-				-0.2
3,071,793	-		PS417_13980	0.31	-1.4
3,071,996	+		PS417_13980	0.47	+0.3
3,072,037	+		PS417_13980	0.50	+0.3
3,072,038	-		PS417_13980	0.50	+0.8
3,072,188	+		PS417_13980	0.61	-1.4
3,072,189	-		PS417_13980	0.61	+1.2
3,072,189	-		PS417_13980	0.61	-0.3
3,072,189	-		PS417_13980	0.61	+1.6
3,072,276	-		PS417_13980	0.68	+0.1
3,072,572	+				+2.8
3,072,573	-				-1.5
3,072,573	-				-0.0
3,072,574	+				-0.3
3,072,692	+				-1.1
3,072,693	-				+0.5
3,072,800	+				-1.5
3,072,801	-		PS417_13985	0.10	-0.2
3,072,913	-		PS417_13985	0.26	-0.8
3,072,913	-		PS417_13985	0.26	-1.3
3,072,913	-		PS417_13985	0.26	+0.1
3,073,129	+		PS417_13985	0.57	-2.0
3,073,130	-		PS417_13985	0.57	-0.7