Strain Fitness in Pseudomonas simiae WCS417 around PS417_13435

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,954,344	-		PS417_13430	0.34	+0.9
2,954,519	+		PS417_13430	0.51	-0.8
2,954,520	-		PS417_13430	0.51	-0.2
2,954,520	-		PS417_13430	0.51	+2.0
2,954,559	-		PS417_13430	0.54	+1.0
2,954,597	+		PS417_13430	0.58	-0.0
2,954,598	-		PS417_13430	0.58	+0.3
2,954,598	-		PS417_13430	0.58	+1.4
2,954,606	+		PS417_13430	0.59	+0.0
2,954,624	+		PS417_13430	0.60	+0.0
2,954,624	+		PS417_13430	0.60	-1.1
2,954,735	+		PS417_13430	0.71	-1.5
2,954,817	-		PS417_13430	0.78	+0.9
2,954,832	-				+1.2
2,954,870	+		PS417_13430	0.83	-0.2
2,954,870	+		PS417_13430	0.83	-1.2
2,954,871	-		PS417_13430	0.83	+1.1
2,954,871	-		PS417_13430	0.83	-0.2
2,954,871	-		PS417_13430	0.83	+0.4
2,954,880	-		PS417_13430	0.84	-0.4
2,955,047	-				-0.4
2,955,050	+				-0.2
2,955,051	-				-0.5
2,955,051	-				+0.2
2,955,051	-				+0.3
2,955,131	-				+0.2
2,955,172	+				+1.1
2,955,172	+				-1.7
2,955,221	-				-1.4
2,955,627	+		PS417_13435	0.56	+1.1
2,955,627	+		PS417_13435	0.56	-0.7
2,955,627	+		PS417_13435	0.56	-1.9
2,955,639	+		PS417_13435	0.58	+0.4
2,955,685	-		PS417_13435	0.64	-0.3
2,955,753	+		PS417_13435	0.72	+0.4
2,955,754	-		PS417_13435	0.72	-2.0
2,955,754	-		PS417_13435	0.72	+1.1
2,955,832	-		PS417_13435	0.82	+3.0
2,956,047	-				-0.5
2,956,105	+				-0.0
2,956,106	-				-0.3
2,956,171	-				+1.1
2,956,171	-				-0.4
2,956,370	-		PS417_13440	0.15	-0.0
2,956,411	+		PS417_13440	0.18	+0.8
2,956,411	+		PS417_13440	0.18	-0.4
2,956,412	-		PS417_13440	0.18	+0.8
2,956,522	+		PS417_13440	0.26	+0.0
2,956,522	+		PS417_13440	0.26	-0.5
2,956,592	-		PS417_13440	0.31	-0.2
2,956,810	+		PS417_13440	0.47	+1.7
2,956,810	+		PS417_13440	0.47	-0.0
2,956,811	-		PS417_13440	0.47	-0.3
2,956,819	+		PS417_13440	0.47	+0.1