Strain Fitness in Pseudomonas simiae WCS417 around PS417_13315

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,924,989	+		PS417_13310	0.15	+0.3
2,924,989	+		PS417_13310	0.15	+0.7
2,924,990	-				-0.2
2,925,119	-		PS417_13310	0.30	-0.2
2,925,163	+				+1.8
2,925,211	+		PS417_13310	0.41	-0.3
2,925,212	-		PS417_13310	0.41	-0.5
2,925,274	+		PS417_13310	0.48	+0.1
2,925,275	-		PS417_13310	0.48	+0.1
2,925,275	-		PS417_13310	0.48	-1.6
2,925,364	-		PS417_13310	0.58	+0.4
2,925,578	-		PS417_13310	0.83	-0.1
2,925,688	+				+0.3
2,925,787	+				-1.0
2,925,788	-				-0.4
2,925,788	-				-0.6
2,925,788	-				+0.1
2,925,850	+				-1.8
2,925,983	-		PS417_13315	0.14	-0.3
2,925,983	-		PS417_13315	0.14	+0.2
2,926,180	+		PS417_13315	0.26	+0.9
2,926,181	-		PS417_13315	0.26	+0.6
2,926,969	+		PS417_13315	0.71	+0.1
2,926,970	-		PS417_13315	0.72	-0.9
2,926,970	-		PS417_13315	0.72	-0.3
2,927,272	+		PS417_13315	0.89	-0.8
2,927,272	+		PS417_13315	0.89	-1.5
2,927,273	-		PS417_13315	0.89	-0.0
2,927,273	-		PS417_13315	0.89	+0.5
2,927,404	+				-0.8
2,927,405	-				-1.2
2,927,452	+				-2.0
2,927,453	-				-1.2
2,927,600	-		PS417_13320	0.12	+2.1
2,927,748	+		PS417_13320	0.24	+0.5
2,928,270	+		PS417_13320	0.68	-0.4
2,928,271	-		PS417_13320	0.68	-0.1
2,928,271	-		PS417_13320	0.68	+0.2
2,928,271	-				+2.5
2,928,387	+		PS417_13320	0.78	-0.7
2,928,387	+		PS417_13320	0.78	+0.6