Strain Fitness in Pseudomonas simiae WCS417 around PS417_12765

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,788,511	+		PS417_12760	0.59	+1.2
2,788,512	-		PS417_12760	0.59	+0.5
2,788,640	+		PS417_12760	0.65	+0.1
2,788,640	+		PS417_12760	0.65	+2.4
2,788,641	-		PS417_12760	0.65	-0.4
2,788,725	+		PS417_12760	0.69	+1.1
2,789,085	-		PS417_12760	0.86	-0.6
2,789,288	+				-2.2
2,789,289	-				-1.4
2,789,531	+		PS417_12765	0.13	-1.0
2,789,531	+		PS417_12765	0.13	-2.2
2,789,531	+		PS417_12765	0.13	-0.8
2,789,894	+		PS417_12765	0.61	-0.3
2,789,895	-		PS417_12765	0.62	-0.9
2,790,113	-				+1.8
2,790,194	+				-0.4
2,790,195	-				+0.0
2,790,195	-				-0.6
2,790,195	-				-1.4
2,790,202	+				-0.2
2,790,203	-				+2.6
2,790,203	-				-1.5
2,790,203	-				+0.2
2,790,203	-				+0.4
2,790,221	+				-0.9
2,790,367	+		PS417_12770	0.61	-1.8
2,790,368	-		PS417_12770	0.61	+3.1
2,790,492	-				+0.2
2,790,545	-				-0.0
2,790,545	-				+0.3
2,790,682	+		PS417_12775	0.15	-1.4
2,790,817	+				+1.8
2,791,033	+		PS417_12775	0.40	-1.1
2,791,072	-		PS417_12775	0.42	+1.2
2,791,072	-		PS417_12775	0.42	-1.6
2,791,072	-		PS417_12775	0.42	-0.3