Strain Fitness in Pseudomonas simiae WCS417 around PS417_12725

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,774,041	-				+0.2
2,774,041	-				+0.2
2,774,073	+				+0.2
2,774,073	+				-2.0
2,774,073	+				+0.1
2,774,246	+				-0.8
2,774,268	+				-0.1
2,774,269	-				+1.4
2,774,436	-				+1.0
2,774,495	-				+0.4
2,774,495	-				+0.0
2,774,495	-				-0.3
2,774,574	-				-0.5
2,774,574	-				+1.0
2,774,632	+				-0.3
2,774,633	-				+2.2
2,774,646	+				+0.4
2,774,646	+				+0.3
2,774,646	+				-0.2
2,774,646	+				-0.3
2,774,647	-				+1.2
2,774,648	+				-0.2
2,774,649	-				+1.7
2,774,649	-				-0.1
2,774,664	+				+1.4
2,774,664	+				-0.2
2,774,665	-				+3.9
2,774,665	-				+2.0
2,774,709	+				-0.9
2,774,729	-				-0.5
2,774,757	+				-1.4
2,774,757	+				+0.1
2,774,903	-		PS417_12725	0.16	+0.9
2,775,063	+		PS417_12725	0.32	+2.3
2,775,115	-		PS417_12725	0.38	-0.2
2,775,525	+		PS417_12725	0.81	+0.1
2,775,670	-				+0.2
2,775,738	+				+0.6
2,775,780	-				+0.3
2,775,816	+				-0.2
2,775,816	+				-0.7
2,775,816	+				-1.7
2,775,816	+				+0.5
2,775,816	+				-0.7
2,775,816	+				-0.1
2,775,817	-				-0.9
2,775,817	-				+0.2
2,775,817	-				-0.7
2,775,817	-				-0.2
2,775,830	-				-0.1
2,776,297	-		PS417_12730	0.40	-0.2
2,776,297	-				+0.2