Strain Fitness in Pseudomonas simiae WCS417 around PS417_12620

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,745,583	+				+2.7
2,745,584	-		PS417_12610	0.87	-0.2
2,745,652	+				-1.7
2,745,652	+				+0.3
2,745,652	+				+0.2
2,745,653	-				-0.4
2,745,653	-				-1.1
2,745,653	-				-0.0
2,745,684	-				-0.8
2,745,684	-				-0.7
2,745,684	-				+0.2
2,745,777	+				+0.2
2,745,777	+				-1.1
2,745,784	+				-0.3
2,745,784	+				-1.2
2,745,784	+				+0.2
2,745,784	+				+0.2
2,745,784	+				+0.1
2,745,784	+				-0.1
2,745,785	-				-0.8
2,745,785	-				-0.5
2,745,785	-				-1.0
2,745,785	-				-0.7
2,745,785	-				+0.2
2,745,785	-				-0.4
2,745,785	-				+0.2
2,745,808	+				+0.2
2,745,808	+				+0.4
2,745,943	-		PS417_12615	0.23	-0.2
2,746,095	+		PS417_12615	0.52	-0.9
2,746,095	+		PS417_12615	0.52	+0.1
2,746,198	-		PS417_12615	0.72	-0.2
2,746,198	-		PS417_12615	0.72	-0.6
2,746,312	+				-1.4
2,746,334	-				-0.8
2,746,347	-				+0.6
2,746,362	+				-1.4
2,746,491	+				-0.4
2,746,491	+				+0.9
2,746,492	-				-0.6
2,746,492	-				+1.0
2,746,492	-				-1.4
2,746,946	-		PS417_12620	0.60	+2.5
2,747,035	-		PS417_12620	0.72	-0.3
2,747,035	-		PS417_12620	0.72	+1.7
2,747,228	+				-0.6
2,747,228	+				-0.1
2,747,228	+				+0.5
2,747,229	-				-0.8
2,747,229	-				+0.0
2,747,229	-				-0.2
2,747,229	-				-0.3
2,747,278	-				+1.3
2,747,280	-				-0.4
2,747,323	+				-0.5
2,747,335	+				-0.6
2,747,336	-				-0.2
2,747,336	-				-2.0
2,747,394	-				-0.7
2,747,493	+		PS417_12625	0.19	+0.0
2,747,546	+		PS417_12625	0.26	+2.0
2,747,677	+		PS417_12625	0.42	-0.1
2,747,757	+		PS417_12625	0.53	-0.3
2,747,757	+		PS417_12625	0.53	+0.2
2,747,758	-		PS417_12625	0.53	+0.5
2,747,874	-				-1.6
2,748,030	+		PS417_12625	0.87	+1.0
2,748,030	+		PS417_12625	0.87	+0.0
2,748,030	+		PS417_12625	0.87	+0.0
2,748,030	+		PS417_12625	0.87	-0.5
2,748,030	+		PS417_12625	0.87	-1.3
2,748,031	-		PS417_12625	0.88	+1.5
2,748,031	-		PS417_12625	0.88	-0.7
2,748,031	-		PS417_12625	0.88	+0.2
2,748,031	-		PS417_12625	0.88	+0.0
2,748,044	+		PS417_12625	0.89	-0.6
2,748,045	-		PS417_12625	0.89	-0.4
2,748,111	+				+0.2
2,748,224	+				-0.6
2,748,225	-				-0.0
2,748,233	+				-0.6