Strain Fitness in Pseudomonas simiae WCS417 around PS417_12250

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,661,826	+		PS417_12240	0.84	-0.2
2,661,866	-		PS417_12240	0.86	+0.5
2,661,908	-		PS417_12240	0.88	-0.3
2,662,157	-				+0.4
2,662,157	-				+0.3
2,662,190	+				-0.6
2,662,190	+				-0.6
2,662,190	+				-1.6
2,662,216	-				-0.3
2,662,261	-		PS417_12245	0.10	-0.2
2,662,351	+		PS417_12245	0.27	+0.5
2,662,464	-		PS417_12245	0.47	-1.2
2,662,464	-		PS417_12245	0.47	-0.3
2,662,647	+		PS417_12245	0.80	-2.2
2,662,662	+				+1.1
2,662,755	+				+1.0
2,662,868	+		PS417_12250	0.13	+0.2
2,662,997	+		PS417_12250	0.27	+1.1
2,662,998	-		PS417_12250	0.27	-0.1
2,663,129	+		PS417_12250	0.41	-1.6
2,663,130	-		PS417_12250	0.42	+1.8
2,663,130	-		PS417_12250	0.42	+0.4
2,663,333	-		PS417_12250	0.64	+2.5
2,663,573	-		PS417_12250	0.90	+0.1
2,663,573	-		PS417_12250	0.90	+0.2
2,663,679	-				+0.3
2,663,679	-				+1.4
2,663,703	+				+1.5
2,663,703	+				+0.6
2,663,703	+				+1.4
2,663,777	-				+0.8
2,663,856	-		PS417_12255	0.23	-0.1
2,664,026	+		PS417_12255	0.72	+0.3
2,664,026	+		PS417_12255	0.72	+0.3
2,664,026	+		PS417_12255	0.72	-2.9
2,664,183	+				+0.3
2,664,184	-				+0.3
2,664,291	+		PS417_12260	0.46	+0.1
2,664,292	-		PS417_12260	0.46	-0.1
2,664,301	+		PS417_12260	0.50	-2.1
2,664,364	-		PS417_12260	0.77	-2.0
2,664,364	-		PS417_12260	0.77	-1.0
2,664,407	+				-2.7
2,664,408	-				+0.2
2,664,408	-				+0.8
2,664,408	-				+0.9
2,664,440	-				-0.5
2,664,448	+				-1.2
2,664,448	+				-0.6
2,664,448	+				-1.3
2,664,448	+				+0.1
2,664,483	-				-1.1
2,664,483	-				-0.4
2,664,487	+				+0.6
2,664,488	-				-1.0
2,664,488	-				+1.1
2,664,491	+				+1.7
2,664,507	+				+1.2
2,664,508	-				+0.3
2,664,543	+				-0.8
2,664,544	-				-0.3
2,664,570	-				-0.2
2,664,605	+				+1.4
2,664,605	+				+1.7
2,664,605	+				-0.5
2,664,607	+				+0.0
2,664,608	-				+0.0
2,664,611	+				+0.7
2,664,612	-				-0.8
2,664,612	-				+1.2